Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01457 ATGGCATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGCTAGGTAGAGTATTAGCCTTGCCAAAAGTTGTTAAGGGGAAGGTGTTGAGCATCTGTAGGTTAACAAAAGAGATAGCACAAGATGATCCTAGAAAAGTGATTCATTCACTGAAAGTAGGACTTGCAATCTCACTTGTTTCTCTTTTCTATTACTATCAACCACTATATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTAGTGGTGGTTTTTGAGTACACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCTGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTAGCTAGCCTATCTGGTGCAACAGGGGAACCTATATTGATTGGCGCGTTTGTCTTTGTGCAAGCTGCCATAGCATCATTCATAAGGTTTTTTCCGAAAGTAAAGGCAAGATATGACTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTGTCTGGTTTTCGAGAGGTTGAAGTGTTGGAAATGGCACACAAGAGGCTATCAACCATATTCATAGGGGGTTCTGCTTGTGTGATGATTTCCATTTTTGTTTGTCCTGTGTGGGCTGGTGAAGAGTTCCACTATTCCATTGCTCACAAGTTGGAAATACTTGGCGATTTCTTGGAAGCTTTTGTACGTGTATACTTCAAGATATCAAAAGaaggagaatctgaagacaacaaaggagattctaaagacaaGTCGTTTTTAGAAGGTTATAAGAAAGTTCTCAATTCCAAAAgtgttgatgactctctggccAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACTTATACCTCAAAGTTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAGATGCAAACATCAACTCTGATATCCAAGGTTCCCAAGAAATTCGTATCACCATCCAAGAGCAATGCTCAGAAATGTGTTTAGAAGCTAGCAAGGCCTTTAAGGAGCTAGGATCATCAATCAGAACAATGACTATGTCATCATCTTCAGACACACATGTTGCAAACGCAAAAGCTGCAGTTAAGAGCCTCAAGACATTGCTCCAATCAAGTTCATGGAAAGAAACAGACCTTCTATCACTCATACCAGCTGCAACAGTGGCTTCACTTCTGATTGATATTATTGAATTCACGGAGAAAATAGCAGATTCAGTGAATAACCTTGCCACCCTCACACATTTTGAAGTTGTAGATACAGATAAATCCACAACAAAAGCACAACAACCATCACAATCATCTCCACACTGTGAATGTGCTGAACCGGGTCCCAAGACTGATCATAATAGCCTCCAACTCGTTATTCTGATTGAGGACTCAGCGCTAGCTGTGTCAGATAGTGAAAAATCAAACAGAGTTTGA 1452 0.3953 MASPNTNQEKAGVLGRVLALPKVVKGKVLSICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGDFLEAFVRVYFKISKEGESEDNKGDSKDKSFLEGYKKVLNSKSVDDSLANFAKWEPGHGKFRFRHPWDLYLKVGALSRQCAYRMEALDANINSDIQGSQEIRITIQEQCSEMCLEASKAFKELGSSIRTMTMSSSSDTHVANAKAAVKSLKTLLQSSSWKETDLLSLIPAATVASLLIDIIEFTEKIADSVNNLATLTHFEVVDTDKSTTKAQQPSQSSPHCECAEPGPKTDHNSLQLVILIEDSALAVSDSEKSNRV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01457 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 436 - -
Gma11g01457 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 10 436 - -
Gma11g01457 483 MobiDBLite consensus disorder prediction 433 455 - -
Gma11g01457 483 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01457 Gma-Chr11 15261942 15264663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01457 27 421 Miscellaneous Gene Families AT1G08440 58.987 7.58e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01457 - - gmx:100813430 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01457 11 15261942 15264663 Gma11g01457 11 15261942 15264663 ECH
Gma12g00841 12 7915732 7918219 Gma11g01457 11 15261942 15264663 GST
Gma12g01781 12 38386272 38389564 Gma11g01457 11 15261942 15264663 PCT
Gma11g01457 11 15261942 15264663 Gma12g01781 12 38386272 38389564 PCT