Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01672 ATGGGTCAGAAGCAGACGAAGAAGAGTGATTATGGGCACAAGAAGAACAAGGAAAAGGACAAAGGAAAGAAGAAAGAGGAAACAACATCCTCAAATCCAACAACGTTAGTGTTAAAGGTGGACATGCATTGCGAAGGATGTGCTTCCAGAATCGTGAAATGCGTTTGCGGTTTCGAAGGCGTGGAGAGTTTGAAGCCGGAGATTGAGACCGGGAAGTTGACCGTCACCGGAAACGTTGACCCCGCCAAACTGAGGGACAAGCTCGCTCGTAAGATGAAGAAGAATGTCGACATTGTCTCTTCCCTTCCCAACAAAGACAAGCCCAAAAACAACGACAAAAAATCTAAAGACAAAGAGGCTCCGGTGACGACGGCAGTACTGAAGGTGACGGCGCTTTGCCCATGCCAGGGTTGCAGCGATAGGGTTCGCAGGGCGGTGTTGAAGACAAAAGGGGTTAAAGACGTGGGTATAGATAGAGAGAAGGGGATGGTGATGGTGAAGGGAACGATGGATGTAACAGCTTTGGCAAAGAAGTTGAAGGAGAAGTTTAAGAGGAATGTTGAGGTGGTACCTCCCAAGAAGGAGAAAGAGAAGGGGAAGGAAAAGGAAAGTGATGAGAAAGGGGAGAATGGCTCTGCCAAGAAGAAGAAAAAGGGTGACAATGGCCATGGCGGCGGCAAAGGAAGCACTGATAAGGATAATGAGAGTGGTGGTGATAATTGCCAGGGGAAAATGGACCAGAACATTGTCAGCTATATGGTACCTGCATATGGTTATGGTTATGGTTATGGTGAATACTCTAATAACTACATGGGGCAATATCATCCTGTGTCGCAGATGTTCAGCGACGAAAATCCCTATGCTTGTCACATTATGTGA 879 0.4699 MGQKQTKKSDYGHKKNKEKDKGKKKEETTSSNPTTLVLKVDMHCEGCASRIVKCVCGFEGVESLKPEIETGKLTVTGNVDPAKLRDKLARKMKKNVDIVSSLPNKDKPKNNDKKSKDKEAPVTTAVLKVTALCPCQGCSDRVRRAVLKTKGVKDVGIDREKGMVMVKGTMDVTALAKKLKEKFKRNVEVVPPKKEKEKGKEKESDEKGENGSAKKKKKGDNGHGGGKGSTDKDNESGGDNCQGKMDQNIVSYMVPAYGYGYGYGEYSNNYMGQYHPVSQMFSDENPYACHIM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01672 292 SUPERFAMILY HMA, heavy metal-associated domain 34 90 IPR036163 GO:0046872
Gma12g01672 292 CDD HMA 135 181 IPR006121 GO:0046872
Gma12g01672 292 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 14 292 - -
Gma12g01672 292 MobiDBLite consensus disorder prediction 106 121 - -
Gma12g01672 292 MobiDBLite consensus disorder prediction 7 28 - -
Gma12g01672 292 Gene3D - 29 106 - -
Gma12g01672 292 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 14 292 IPR044594 GO:0046872
Gma12g01672 292 MobiDBLite consensus disorder prediction 95 121 - -
Gma12g01672 292 CDD HMA 37 90 IPR006121 GO:0046872
Gma12g01672 292 Gene3D - 122 197 - -
Gma12g01672 292 Pfam Heavy-metal-associated domain 135 183 IPR006121 GO:0046872
Gma12g01672 292 Pfam Heavy-metal-associated domain 38 94 IPR006121 GO:0046872
Gma12g01672 292 SUPERFAMILY HMA, heavy metal-associated domain 134 181 IPR036163 GO:0046872
Gma12g01672 292 MobiDBLite consensus disorder prediction 1 31 - -
Gma12g01672 292 MobiDBLite consensus disorder prediction 190 242 - -
Gma12g01672 292 MobiDBLite consensus disorder prediction 190 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01672 Gma-Chr12 37057158 37058430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01672 - - vra:111241509 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01672 12 37057158 37058430 Gma12g01672 12 37057158 37058430 ECH
Gma12g01672 12 37057158 37058430 Gma12g00708 12 6298277 6300000 PCT
Gma12g01672 12 37057158 37058430 Gma11g01599 11 17218226 17220240 PCT
Gma12g00708 12 6298277 6300000 Gma12g01672 12 37057158 37058430 PCT
Gma11g01599 11 17218226 17220240 Gma12g01672 12 37057158 37058430 PCT