Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00708 ATGGGCGCGAAGAAGAAGAATGGCAACAACAAGGAGAACGAAGACAACACCACCACCACCGTCGTCTTGAAGGTCCAAATGCATTGCGACGGTTGCGCTTCCAAAATCATCAAGCACCTCCGCGCTTTCCAAGGTGTGGAGACGGTGAAGGCGGAGAGCGACGCCGGGAAGGTGACCGTGACCGGGAAAGTGGACCCCACGAAAGTGAGGGACAACCTGGCGGAGAAGATAAGGAAGAAGGTGGAACTGGTGTCTCCACAGCCCAAGAAGGAGAAAGAGAACGAGAAAGACCCCAAACCCAACAACAAATCCGAGAACaaaacccaggacaaaaaaaccaaggacaaaGAGGTGGTGACTACAGCGGTTCTGAAAGTGGCACTGCATTGCCAGGGTTGCCTAGACAGGATTGGCAAAACTGTGTTGAAAACCAAAGGAGTGCAAGAAATGGCCATTGACAAGGAGAAGGAAATGGTGACTGTGAAGGGGACAATGGATGTGAAGGCTCTGGCAGAGAATCTCATGGAGAAGCTTAAGAGGAAGGTTGAGGTGGTTCCTCCCCAGAAAGATAAGGAAGGTGACAACAAGGAAGGTGGTGGTGGTGAGAAAGGATCAGGCAAGAAGAAGAACAAGGGTGGTGGAGGAGATAAGAATGAGAATATTGAAGATGGAATAGAGAAAATAGAGCATAACAGAATGGAGTATTTGGCACCACCTGCTTTTGGCTTTGGTTATGGACCTTATGGTGGTTATGGGCATGGACATGGGCATGGCAACATCGGTGGGTATAGCTGTGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCGGCACCACAAATGTTCAGTGATGAGAACCCGAATGCTTGTTCTGTCATGTGA 891 0.486 MGAKKKNGNNKENEDNTTTTVVLKVQMHCDGCASKIIKHLRAFQGVETVKAESDAGKVTVTGKVDPTKVRDNLAEKIRKKVELVSPQPKKEKENEKDPKPNNKSENKTQDKKTKDKEVVTTAVLKVALHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRKVEVVPPQKDKEGDNKEGGGGEKGSGKKKNKGGGGDKNENIEDGIEKIEHNRMEYLAPPAFGFGYGPYGGYGHGHGHGNIGGYSCVPVYPEQMHFHLHAPAPQMFSDENPNACSVM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00708 296 MobiDBLite consensus disorder prediction 71 116 - -
Gma12g00708 296 SUPERFAMILY HMA, heavy metal-associated domain 17 80 IPR036163 GO:0046872
Gma12g00708 296 CDD HMA 123 183 IPR006121 GO:0046872
Gma12g00708 296 Gene3D - 16 92 - -
Gma12g00708 296 Gene3D - 116 192 - -
Gma12g00708 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 296 IPR044594 GO:0046872
Gma12g00708 296 SUPERFAMILY HMA, heavy metal-associated domain 119 183 IPR036163 GO:0046872
Gma12g00708 296 CDD HMA 22 82 IPR006121 GO:0046872
Gma12g00708 296 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 4 296 - -
Gma12g00708 296 Pfam Heavy-metal-associated domain 23 80 IPR006121 GO:0046872
Gma12g00708 296 Pfam Heavy-metal-associated domain 124 183 IPR006121 GO:0046872
Gma12g00708 296 MobiDBLite consensus disorder prediction 181 221 - -
Gma12g00708 296 ProSiteProfiles Heavy-metal-associated domain profile. 27 75 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00708 Gma-Chr12 6298277 6300000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00708 - - gmx:100797817 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00708 12 6298277 6300000 Gma12g00708 12 6298277 6300000 ECH
Gma12g00708 12 6298277 6300000 Gma11g01599 11 17218226 17220240 GST
Gma12g01672 12 37057158 37058430 Gma12g00708 12 6298277 6300000 PCT
Gma12g00708 12 6298277 6300000 Gma12g01672 12 37057158 37058430 PCT