Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01599 ATGTTTCACACTTACCACTACTACCAATACTCCTCGCACAACACAACCACAATGGCCgcgaagaagaagaatggcggcggaaacggcaacaacaaggagaacgaagacagcaccatcaccGTCGTCTTGAAGGTCGAAATGCACTGCGACGGTTGCGCTTCCAAAATCATCAAACACCTCCGCTGTTTCCAAGGTGTGGAAACGGTGAAGGCTGATAGCGACGCCGGGAAGGTGACCGTGACCGGAAAAGTGGACCCCACGAAAGTGAGGGATAACCTGGCGGAGAAGATAAGGAAGAAGGTGGAACTGGTGTCTCCGCAGCCCAAGAAGGAGCAGGAGAACGAGAAAGAGAACAAGGATGCTAAGGCAAACAACAAATCCGAGAATAACaaaacccaggacaaaaaaaccaaggacaaaGAGGTGGTAACCACCGCTGTTCTGAAGCTGGCATTGCATTGCCAGGGTTGCCTAGACAGGATTGGCAAAACTGTGTTGAAAACCAAAGGAGTGCAAGAAATGGCCATTGACAAGGAAAAGGAAATGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGCAGAGAATCTCATGGAGAAGCTGAAGAGGAGGGTTGAGGTGGTTCCTCCAAAGAAAGACAAGGAAGGTGGTGGTGGTGATGATGAGAAGGAAGTATCAGGGAAGAAGAAGAACAAGGGTGGTGGTGGAGGAGACAAGAATGAGAATATTGAAGATGGAATAGAGAAAATAGAGTATAACAGAATGGAGTATTTGGCACCACCTGCTTTTGGCTTTGGTTATGGACCTTATGGTGGTGGTTATGGACATGGACATGGGCATGGGCATGGCAACATTGGTGGGTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACTTGCATGCACCACCACCACAAATTTTCAGTGATGAAAACCCGAATGCTTGTTCTGTCATGTGA 969 0.4365 MFHTYHYYQYSSHNTTTMAAKKKNGGGNGNNKENEDSTITVVLKVEMHCDGCASKIIKHLRCFQGVETVKADSDAGKVTVTGKVDPTKVRDNLAEKIRKKVELVSPQPKKEQENEKENKDAKANNKSENNKTQDKKTKDKEVVTTAVLKLALHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRRVEVVPPKKDKEGGGGDDEKEVSGKKKNKGGGGGDKNENIEDGIEKIEYNRMEYLAPPAFGFGYGPYGGGYGHGHGHGHGNIGGYSYVPVYPEQMHFHLHAPPPQIFSDENPNACSVM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01599 322 SUPERFAMILY HMA, heavy metal-associated domain 143 206 IPR036163 GO:0046872
Gma11g01599 322 Coils Coil 109 131 - -
Gma11g01599 322 SUPERFAMILY HMA, heavy metal-associated domain 36 99 IPR036163 GO:0046872
Gma11g01599 322 MobiDBLite consensus disorder prediction 99 139 - -
Gma11g01599 322 Pfam Heavy-metal-associated domain 43 100 IPR006121 GO:0046872
Gma11g01599 322 Pfam Heavy-metal-associated domain 151 203 IPR006121 GO:0046872
Gma11g01599 322 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 21 322 - -
Gma11g01599 322 CDD HMA 42 102 IPR006121 GO:0046872
Gma11g01599 322 Gene3D - 140 216 - -
Gma11g01599 322 Gene3D - 38 112 - -
Gma11g01599 322 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 21 322 IPR044594 GO:0046872
Gma11g01599 322 MobiDBLite consensus disorder prediction 206 244 - -
Gma11g01599 322 CDD HMA 152 207 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01599 Gma-Chr11 17218226 17220240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01599 - - gsj:114377132 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01599 11 17218226 17220240 Gma11g01599 11 17218226 17220240 ECH
Gma12g00708 12 6298277 6300000 Gma11g01599 11 17218226 17220240 GST
Gma12g01672 12 37057158 37058430 Gma11g01599 11 17218226 17220240 PCT
Gma11g01599 11 17218226 17220240 Gma12g01672 12 37057158 37058430 PCT