Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00907 ATGCAGCTTTTTCACAAACCCACCAAGGGCCAGTCTCTGGTTAATTTGATCTTGGTTTCTTCATCGTTCTGTGCCCTCTACCTCATTGTATCAGTGCTGCTTTTGGGGCCTTCAAAGCTAGTTCATGTGAATAGGTCATCACAAGATGTGTCCACACCAACCACCATTGATCACCTTGTGTTTGGAATTGCTTCAAGCACGAGTTCGTGGGGCAAGAGGAAGGAGTACGTGAAGCTGTGGTGGAACAACACCAATACCAAGAAAGCAATGAAAGGGTGTGTGTTTTTGGATAGTCTCTCGGATGAAGACAATGCTAGGAATGCGAATGATACTTCTCTTCCTCCTCTCTGTGTCTCTCAGGACACTTCACGGTTTCGTTTCACTCACAAGGGTGGTCTGCGCTCAGCAATACGCGTGGCGCGTGTTGTTGCGGAGACCGTGGCGCTGTACAATGATTCGGACGTGAGGTGGTATGTGTTTGGAGACGATGACACGGTTTTCTTCCCGGAGAATGTGCAGAAGACGCTTTCCAAGTATGATCATGAGCTTTGGTACTATATTGGTGCACACTCTGAGGTTTATGAGCAGAACCGGGTGTTTGGTTTTGGAATGGCTTTTGGGGGTGCAGGTTTTGCTATCAGCTCCTCTCTGGCTAAGGTCTTGGCCAAGGTTTTTGATTCGTGTATTGAAAGGTACCCTCATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACACATGAACCCGGTTTTCACCAGGTAGATTTAAAGGGAAATACCTTTGGCCTATTGGCGTCGCATCCTTTAACTCCTCTGTTGTCGCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAACATGACAACTAAACAAGCTCTGAACCATTTATTAGAAGCTGTAAATGTGGATTCCCAGAGGATGCTGCAACAAGCAATATGCTATGACAAATGGTTTTCATGGACAGTTTCAGTGTCATGGGGATACGCTGTTCAGGTTTTCCCAAACCATATGCTTTTGCCAGATGTTCTGAAGGTGCAAGAGACATTCAAGCAGTGGAGGAAGGGAAACATGCTGGCAAAATCATATACTTTCAACACAAGAGAACTTCACCCTGACCCTTGTAAAAGATCCACTGTTTTCTTTCTAGACAATGTGTCTTCTGGCAAGGATGGCATCATTAGCAGTTACAAGAAATCTTTTCAGAATTGCTCAATCGATGACGTATCACCAAAGAAACTGGAAGTGATCAAAGTGGTCACAAATAGGCTAGACCTTGACATCAAACAGTTGCATGCTCCAAGAAGGCATTGTTGTGATGTTTTGCACTCTACTGCCCGGGACAAAATGGAAATTGCAATAAGGGAATGCGAAGATGAAGAATTGGTTTACATGCACTGA 1425 0.4498 MQLFHKPTKGQSLVNLILVSSSFCALYLIVSVLLLGPSKLVHVNRSSQDVSTPTTIDHLVFGIASSTSSWGKRKEYVKLWWNNTNTKKAMKGCVFLDSLSDEDNARNANDTSLPPLCVSQDTSRFRFTHKGGLRSAIRVARVVAETVALYNDSDVRWYVFGDDDTVFFPENVQKTLSKYDHELWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGLLASHPLTPLLSLHHPDYTDPIFPNMTTKQALNHLLEAVNVDSQRMLQQAICYDKWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWRKGNMLAKSYTFNTRELHPDPCKRSTVFFLDNVSSGKDGIISSYKKSFQNCSIDDVSPKKLEVIKVVTNRLDLDIKQLHAPRRHCCDVLHSTARDKMEIAIRECEDEELVYMH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00907 474 Pfam Protein of unknown function, DUF604 196 447 IPR006740 -
Gma12g00907 474 Gene3D - 46 305 - -
Gma12g00907 474 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 472 - -
Gma12g00907 474 PANTHER FRINGE-RELATED 10 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00907 Gma-Chr12 9124257 9126163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00907 13 439 Glycosyltransferase AT1G05280 54.358 3.70e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00907 - - gmx:100813816 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00907 12 9124257 9126163 Gma12g00907 12 9124257 9126163 ECH
Gma12g00907 12 9124257 9126163 Gma06g02698 06 50647613 50650834 GST
Gma13g02709 13 41733382 41735446 Gma12g00907 12 9124257 9126163 PCT
Gma12g00907 12 9124257 9126163 Gma13g02708 13 41727392 41729389 PCT