Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02709 ATGATAATCTGCAATGCACAACTTCATCTAGCTCCCTCCTTAATCATGAAGTCAATTCACAAACCTATCAAAACCAAACCCCTGATGAAATTCATTTTAGTCTCCTCTTCATTTTGTGCCATTTCTCTGTGTGTATCAGTGTTACTCCTAGCCACACCAAAGATAGTAGAGGTGGGTTCTTCACCACAATATGTGTCTGATCCCACCACTGTTGATCATCTTGTGTTTGGAATTGCATCAAGTGGAATTTCATGGCCTAAGAGGAAGGAATACAGCAAGATCTGGTGGAATTGGAAACTCAATAAAACAATGAGAGGATGTGTTTTCGTAGATACACTTCCACATGAAGAAAATGCCAACAACAACAATGATGGTTCTCGTCCTCCTCTCTGTGTCTCTGAAGACACTTCGCAGTTTCTCTACACTTACAAGCCTGGTGGTCTCCGATCAGCAATCCGCGTGGCACGTGTTGTGAAAGAGACTGTGGCTTTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCAGAATTTGGTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTACGTTGGGTCGTACTCAGAGATTTATGAGGGCTCCCAGGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCTCTAGCACAAGTCCTAGCCAAGGTTTTTGATTCATGCATACAAAGGTATTCTCATCTATATGGAAGTGATGCCAGGGTGTACTCTTGCATAACAGAACTAGGTGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGAGGGGAGATATATTTGGCCTATTGGCTGCACATCCATTAACTCCCTTGGTGTCCCTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGACAACTACAAAATCTCTGCAACATTTATTTGAAGCCGTTAATGTTGATTCCGAGAGGATCCTACAACAAACAGTTTGTTATGAAAGGAGGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGGTGTTCAAGTGTTCCAGAACAACATGCTTTTGCCAGATGTTCTAAGAGTGGAAAAAACATTCAAGCAATGGAAGGAAGGAAATGTTTTGGCAGGAATATATACTTTCAATACAAGAGAACTTCACCCAGACCAATGTAAACGACCCACCATTTTCTATCTAGATAAAGTGTCTTCTGGCAAAGATGGCATCATAAGCAGTTACAGGAAATATTCTCAAAATTGCTCATACAAGGAACCAATGAAGAAATTGGAGGTGATCAAAGTGTTTACAAATAAGTTATACCTTGACAATAAACAGTTGCAGATTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAACGCTGGTGACTCAATGGAAATTGCAATCAGAGAATGCAAATATGAAGAAATGATTTACATGCACTAG 1464 0.4078 MIICNAQLHLAPSLIMKSIHKPIKTKPLMKFILVSSSFCAISLCVSVLLLATPKIVEVGSSPQYVSDPTTVDHLVFGIASSGISWPKRKEYSKIWWNWKLNKTMRGCVFVDTLPHEENANNNNDGSRPPLCVSEDTSQFLYTYKPGGLRSAIRVARVVKETVALNHSGVRWYVFGDDDTIFFPQNLVKTLSKYDHRLWYYVGSYSEIYEGSQVFGFGMAFGGGGFAISSSLAQVLAKVFDSCIQRYSHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGDIFGLLAAHPLTPLVSLHHPDHTDPIFPNMTTTKSLQHLFEAVNVDSERILQQTVCYERRFSWTISVSWGYGVQVFQNNMLLPDVLRVEKTFKQWKEGNVLAGIYTFNTRELHPDQCKRPTIFYLDKVSSGKDGIISSYRKYSQNCSYKEPMKKLEVIKVFTNKLYLDNKQLQIPRRHCCDVLPSNAGDSMEIAIRECKYEEMIYMH 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02709 487 Gene3D - 62 337 - -
Gma13g02709 487 Pfam Protein of unknown function, DUF604 213 460 IPR006740 -
Gma13g02709 487 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 22 485 - -
Gma13g02709 487 PANTHER FRINGE-RELATED 22 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02709 Gma-Chr13 41733382 41735446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02709 68 452 Glycosyltransferase AT1G05280 55.471 2.32e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02709 - - gmx:100779943 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02709 13 41733382 41735446 Gma13g02709 13 41733382 41735446 ECH
Gma13g02709 13 41733382 41735446 Gma12g00907 12 9124257 9126163 PCT
Gma13g02709 13 41733382 41735446 Gma06g02698 06 50647613 50650834 PCT
Gma12g00906 12 9118323 9122931 Gma13g02709 13 41733382 41735446 PCT