Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02708 ATGCAGTCACTTCACAAAATCGCCACAACCCAAACTCTGATAAACTTGGTTTTAGTCTCGTCTTCATTTTGTGCCATTTATATCCTCGTATCAGTGGTACTATTAGGAACACCATCAAAGCTAGAAAACTTGCATTCTTCATCACATAATGTGTATGAATCTAAAACCACCACAACCCTTGACCATCTTGTGTTTGGAATTGCTTCAAGTCGGTCTTCATGGCCTAAGAGGAAGGAATACGTGAAGCTCTGGTGGAACACCATACGCAACACAACAATGAGAGGATGCGTATTCGTGGATACACTTCCACAAGACAAAGATAACAACAACAATGCCAGTACCCTTCCTCCTCTCTGTGTCTCCCAAGACACTTCACGGTTTCGCTACACTTACAGTGGTTGGGGAGGGGGAATGAGATCAGCAATTCGTGTGGCGCGTGTGGTGAAGGAGACAGTGGCACGGATGAACCATTCTCATATTAGGTGGTACGTGTTTGGGGACGATGACACGCTCTTCTTCCCTCAGAATGTGGTCAAAACGCTCTGCAAATATGATCACAGGCTTTGGTACTACGTTGGTGCTAACTCCGAGAGTTATAAGCAGACATGGTTTTTTGGATTTGGAATGGGATTTGGTGGGGCCGGTTTTGCTATCAGTTCGTCTCTGGCAACAGTCTTGGTCAAGGTCTTTGATTCTTGCATAGAAAGGTACCCAGAACTGTATGGAAGTGATGCCAGGGTCTACGCTTGCATAACAGAACTAGGTGTAGGATTAACACATGAACCCGGTTTTCACCAGGTTGATTTAAGGGGAAATGCCTTTGGCCTATTGGCTGCACATCCATTAACACCCTTGTTGTCCCTGCATCACTTGGACAACATTGATCCAATTTTTCCCAACATGACAATCATAAAAGCTCTACAACATTTATATGAAGCGGCTAAAGTTGATTCCCAGAGGCTTCTACAACAAACAGTTTGTTATGACAAACGGTTGTCATGGACAATCTCGGTGTCTTGGGGCTATGCTGCCCAAGTGTTCCATAACCATTTGTCTTTGCCAGATGTTGTCAGAGTTCAAAAAACATTCAAGCACTGGACCAGAGGAACTGCTTTGGCAGACCAATTTACTTTTGACACCAAAGAACTTCACACTGACCCATGTAGAAGGCCCACCATATTCTATTTGGAAAATTTGTCCCGTGGTGAAGATGGCATAATAATAAGCAATTACCGGAAATCTATCCAAAATTGCTCATCCAATGTGGCACCTGAAGTTATCAGAGTGGCCTCAAGTAAGCTAGAGCTTGGCATCAAACAGTTGCTGGCTCAAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAGCGTTTCTGACCAAATGGAGATTGCAATAAGGGAATGCAAAGAGGATGAATTGATTAGCATGCAATGA 1431 0.4396 MQSLHKIATTQTLINLVLVSSSFCAIYILVSVVLLGTPSKLENLHSSSHNVYESKTTTTLDHLVFGIASSRSSWPKRKEYVKLWWNTIRNTTMRGCVFVDTLPQDKDNNNNASTLPPLCVSQDTSRFRYTYSGWGGGMRSAIRVARVVKETVARMNHSHIRWYVFGDDDTLFFPQNVVKTLCKYDHRLWYYVGANSESYKQTWFFGFGMGFGGAGFAISSSLATVLVKVFDSCIERYPELYGSDARVYACITELGVGLTHEPGFHQVDLRGNAFGLLAAHPLTPLLSLHHLDNIDPIFPNMTIIKALQHLYEAAKVDSQRLLQQTVCYDKRLSWTISVSWGYAAQVFHNHLSLPDVVRVQKTFKHWTRGTALADQFTFDTKELHTDPCRRPTIFYLENLSRGEDGIIISNYRKSIQNCSSNVAPEVIRVASSKLELGIKQLLAQRRHCCDVLPSSVSDQMEIAIRECKEDELISMQ 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02708 476 Gene3D - 50 292 - -
Gma13g02708 476 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 7 475 - -
Gma13g02708 476 Pfam Protein of unknown function, DUF604 201 449 IPR006740 -
Gma13g02708 476 Coils Coil 304 324 - -
Gma13g02708 476 PANTHER FRINGE-RELATED 7 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02708 Gma-Chr13 41727392 41729389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02708 13 442 Glycosyltransferase AT1G05280 50.685 4.40e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02708 - - gmx:100778878 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00907 12 9124257 9126163 Gma13g02708 13 41727392 41729389 PCT
Gma06g02698 06 50647613 50650834 Gma13g02708 13 41727392 41729389 PCT