Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00878 ATGGCTAAGAGCTCATTCAAGATGGAACACCCACTTGAGAGGAGGCAGGCTGAAGCATCTCGAATAAGAGAGAAGTATCCTGACAGAATTCCAGTAATTGTTGAAAGGGCTGAGAAGAGTGATGTTCCTGAAATTGACAAGAAAAAGTATCTTGTACCCGCTGATTTGACTGTTGGTCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAGCTGAGTCCTGAGAAGGCGATCTTCATTTTTGTTAAGAATATTTTACCACCAACTGCGGCAATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGCTTTCTATATATGACTTACAGTGGAGAGAACACATTTGGGCTTGTGTTCTGA 363 0.416 MAKSSFKMEHPLERRQAEASRIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLVF 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00878 120 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Gma12g00878 120 MobiDBLite consensus disorder prediction 1 20 - -
Gma12g00878 120 CDD Ubl_ATG8 12 114 - -
Gma12g00878 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Gma12g00878 120 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Gma12g00878 120 Gene3D - 1 118 - -
Gma12g00878 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00878 Gma-Chr12 8610458 8612656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00878 K08341 - gmx:100301895 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00878 12 8610458 8612656 Gma12g00878 12 8610458 8612656 ECH
Gma12g00878 12 8610458 8612656 Gma15g01019 15 8587874 8592147 ECH
Gma12g00878 12 8610458 8612656 Gma07g02513 07 47533755 47537144 ECH
Gma12g00878 12 8610458 8612656 Gma06g02720 06 50979386 50981612 GST