Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g02513 ATGGCCAAAAGCCCCTTCAAGCTTGAACATCCCTTGGAAAGAAGGCAGGCTGAGTCTGCTCGCATTAGAGACAAGTATCCTGATAGAATACCTGTGATTGTTGAGAAAGCTGAAAGAAGTGACATCCCAGACATCGATAAGAAGAAGTACCTTGTCCCAGCAGATTTGACTGTTGGCCAATTTGTTTATGTTGTCCGTAAAAGGATTAAGGTCAGTGCAGAGAAGGCTATTTTTGTTTTTGTCAATAACACTCTACCTCCAACTGCCGCTTTGATGTCTTCTATTTATGAGGAAAATAAAGACGATGATGGTTTTCTTTACATGACTTACAGTGGAGAGAACACTTTCGGTTCTCGCTAG 360 0.4167 MAKSPFKLEHPLERRQAESARIRDKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKVSAEKAIFVFVNNTLPPTAALMSSIYEENKDDDGFLYMTYSGENTFGSR 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g02513 119 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Gma07g02513 119 MobiDBLite consensus disorder prediction 1 20 - -
Gma07g02513 119 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Gma07g02513 119 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Gma07g02513 119 Gene3D - 1 117 - -
Gma07g02513 119 CDD Ubl_ATG8 12 114 - -
Gma07g02513 119 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g02513 Gma-Chr7 47533755 47537144 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g02513 K08341 - gmx:100500023 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02513 07 47533755 47537144 Gma07g02513 07 47533755 47537144 ECH
Gma12g00878 12 8610458 8612656 Gma07g02513 07 47533755 47537144 ECH
Gma06g02720 06 50979386 50981612 Gma07g02513 07 47533755 47537144 ECH