Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01019 ATGCAGAGTTATGGGCACTTGATATTGGCTCCAAGATTGTTGTCTCTAAAGGACACTCGATCAAACTTCCTTGTTGAATCTGACTCACAGGCAGCTATCAACCTTATTCAGAAAGGAAACAAACCCCTCGTTTCAATCATTGATCCTTTTCTGTTAGATACCAGTTACTCTTCCAATTTCGTCATGGCCAAAACCTCCTTCAAGCTTCAGCATCCTTTGGAGAGAAGGCAGGCTGAAGCTTCTCGCATTAGAGAGAAATATCCTGATAGAATACCTGTGATTGTGGAGAAAGCTGAAAGAAGTGACATTCCAGACATTGATAAGAAAAAATACCTTGTCCCTGCTGATTTGACTGTTGGCCAGTTTGTTTATGTTGTTCGCAAAAGGATTAAGCTCAGTGCAGAGAAGGCTATTTTTGTTTTCATCAACAACACTCTACCTCCAACTGCTGCATTGATGTCTGCTATTTATGAGGAAAATAAGGATCAAGATGGCTTTCTTTACATGACTTACAGTGGAGAGAACACCTTCGGATCCCATTAG 543 0.4088 MQSYGHLILAPRLLSLKDTRSNFLVESDSQAAINLIQKGNKPLVSIIDPFLLDTSYSSNFVMAKTSFKLQHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDQDGFLYMTYSGENTFGSH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01019 180 PANTHER AUTOPHAGY-RELATED PROTEIN 42 178 - -
Gma15g01019 180 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 42 178 IPR004241 -
Gma15g01019 180 CDD Ubl_ATG8 73 175 - -
Gma15g01019 180 Pfam Autophagy protein Atg8 ubiquitin like 75 178 IPR004241 -
Gma15g01019 180 SUPERFAMILY Ubiquitin-like 64 178 IPR029071 -
Gma15g01019 180 Gene3D - 53 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01019 Gma-Chr15 8587874 8592147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01019 K08341 - gmx:100527884 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01019 15 8587874 8592147 Gma15g01019 15 8587874 8592147 ECH
Gma12g00878 12 8610458 8612656 Gma15g01019 15 8587874 8592147 ECH
Gma06g02720 06 50979386 50981612 Gma15g01019 15 8587874 8592147 ECH