Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00673 ATGTATAAGAACCAGCTGCAGGAGCTGGCACAGCGGAGCTGCTTCAACCTGCCTTCGTACACGTGCATTCGGGAAGGTCCTGATCACGCGCCCCGCTTCAAGGCCACCGTTAACTTTAACGGCGAGATCTTCGAGAGCCCTCATTACTGTTCAACGCTCCGTCAGGCGGAGCACTCCGCCGCCGAGGTGGCGCTCAATTCCCTCTCTAACCGTGCTCCCTCTCACTCCCTCGCCGCCAGGATCCTCGATGAAACGGGGGTGTACAAGAACCTCTTGCAGGAAATTGCGCAGAGGGTAGGGGCGCCGTTGCCGCAGTATTTTACATTCAGGTCAGGGTTAGGACATTTACCTGTTTTTACGGGGACAGTGGAGTTAGCTGGAATCATGTTTACTGGTGAACCTGCCAAGAATAAGAAACAAGCGGAGAAAAATGCAGCTATGGCCGCATGGTCTTCTCTAAAGCAATTGGCAAAAGAAACTGCAAGGTCTTCAACTGAACCCGAGAACAATGACGAACTAGAACAGATCACTATAGCACGGGCCTTACTGAACTACAGACTGAAGGAAAAGATTTCAATGTCAAATTCAAATGCTCCAGTTCCATTTCCAAAGAAGTTTCAGATTCAAAATCCCAGGCCAACCAGTCCTCAGCCCCCACCTGCTGCTACATCAAAGATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGACATCTAGTAGGAGCATCTCCAGCACGAGCTTCCTGCGACAATTCTGCGATGCCACAGCTTTCTGCTACACCAGAAAGCCGAGGAATCCGTCGCCCTAAGTTCCCTGCAGCCGGAGCAGCACCTTATGTTCCCATTAGACAAATGAGGCCTTGTCAGGGGATGGCACCTCCGGTGACAATAAGGACTGCAATACCTGTATTCTCCCCACCGCCAGCAGCAGCTGCAGTGTCCCATCAAGTACTACGAGCTCCTCATGTACGAGTTGCACCTCCGGTCACTATTCGGCAAGCTGTTCCAGTATTTGCTACTCCACCTCCTCCGATTCGAAAAGATGAACCTGTTCCCATCCCAAAAGACGAACCACCAACCATTAGTGCCCCTAGCCCGGAAGACAAACTGCCAGCTAAAACGCCAGAGGCAGAGACCAAGACTGAGAACATTCCACCTAAACCTGACATGGTAAAGAGCTTGGAGCAGCTGAAAATTTGA 1206 0.5124 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSRHLVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPYVPIRQMRPCQGMAPPVTIRTAIPVFSPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFATPPPPIRKDEPVPIPKDEPPTISAPSPEDKLPAKTPEAETKTENIPPKPDMVKSLEQLKI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00673 401 PANTHER RNA BINDING PROTEIN, PUTATIVE-RELATED 1 368 - -
Gma12g00673 401 MobiDBLite consensus disorder prediction 196 211 - -
Gma12g00673 401 Gene3D - 84 155 - -
Gma12g00673 401 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Gma12g00673 401 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Gma12g00673 401 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Gma12g00673 401 SMART DRBM_3 2 69 IPR014720 -
Gma12g00673 401 SMART DRBM_3 88 154 IPR014720 -
Gma12g00673 401 Gene3D - 2 83 - -
Gma12g00673 401 PANTHER - 1 368 - -
Gma12g00673 401 MobiDBLite consensus disorder prediction 373 387 - -
Gma12g00673 401 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Gma12g00673 401 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Gma12g00673 401 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Gma12g00673 401 MobiDBLite consensus disorder prediction 196 222 - -
Gma12g00673 401 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Gma12g00673 401 MobiDBLite consensus disorder prediction 342 401 - -
Gma12g00673 401 MobiDBLite consensus disorder prediction 247 272 - -
Gma12g00673 401 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00673 Gma-Chr12 5882292 5885517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00673 - - gmx:100812728 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00673 12 5882292 5885517 Gma12g00673 12 5882292 5885517 ECH
Gma12g00673 12 5882292 5885517 Gma11g01638 11 17739622 17743494 GST
Gma13g02900 13 43594280 43597076 Gma12g00673 12 5882292 5885517 PCT
Gma12g00673 12 5882292 5885517 Gma13g02900 13 43594280 43597076 PCT