Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01638 ATGTATAAGAACCAGCTGCAGGAGCTGGCACAGCGGAGCTGCTTCAACCTGCCTTCGTACACGTGCATTCGGGAAGGTCCCGATCACGCGCCGCGCTTCAAGGCCACCGTGAACTTTAACGGCGAGATCTTCGAGAGTCCTCACTACTGTTCAACGCTCCGTCAGGCGGAGCACTCCGCCGCCGAGGTCGCTCTCAATTCCCTCTCCAATCGTGCTCCCTCTCACTCCCTCGCCGCCAGGATCCTCGATGAAACGGGAGTGTACAAGAACCTCTTGCAGGAAATTGCACAGAGGGTAGGGGCGCCGTTGCCCCAGTATTTTACATTCAGGTCAGGGTTAGGACATTTACCTGTTTTTACTGGCACAGTAGAGTTAGCTGGAATCATGTTTACTGGTGAACCTGCCAAGAATAAGAAACAAGCGGAGAAAAATGCAGCTATGGCAGCTTGGTCTTCTCTAAAGCAATTGGCAAAAGAAACTGCAAGGTCTTCAACTGAACCCGAGAACAATGACGAACTAGAACAGATCACTATAGCACGGGCCTTGCTGAACTACAGACTGAAGGAAAAGATTTCAATGTCAAATTCAAATGCTCCAGTTCCATTTCCAAAGAAGTTTCAGATTCAAAATCCCAGGCCAACCAGTCCTCAGCCTCCACCTGCCACCACATCAAAGATTCTTCCTTTAATTTGCCAAAAGGGAGCTCATCGAAGCAGGCATCTAGTAGCAGCATCTCCGGCACCAGCTTCCAGCGACAATTCTGTGATGCCACAACTTCCAGCTACACCAGATAGCCGAGGAATCCGTCGCCCTAAGTTCCCTGCAGCCGGAGCAGCACCTTATGTTCCCATTAGACAAATGAGGCCTTGTCAGGGGATGGCACCTCCAGTGACGATAAGGACTGCAATACCTGTATTCTCCCCACCACCACCGCCAGCAGCAGCTGCAGTGTCCCATCAAGTACTACGAGCTCCTCATGTACGAGTTGCTCCTCCGGTCACTATTCGGCAAGCTGTTCCGGTATTTGCTGCTCCACCTCCACCAgtccgaaaagatgaacctgttcccatcccaaaagacgaacctgtcgccgtccctaaagacgaCTCACCAACCATTAGTGCCCCTAGCTTGGAAGACAAACTGCCAACTAAAACTCCCGAGACAGAGACCAAGACTGAGAACATTCCACCTGAACCTGAGACAGTGCAGAGCTTGGAGCAGCTGAAAATCTGA 1236 0.4879 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIARALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRHLVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPYVPIRQMRPCQGMAPPVTIRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIPKDEPVAVPKDDSPTISAPSLEDKLPTKTPETETKTENIPPEPETVQSLEQLKI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01638 411 MobiDBLite consensus disorder prediction 396 411 - -
Gma11g01638 411 MobiDBLite consensus disorder prediction 343 411 - -
Gma11g01638 411 MobiDBLite consensus disorder prediction 196 211 - -
Gma11g01638 411 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Gma11g01638 411 MobiDBLite consensus disorder prediction 196 223 - -
Gma11g01638 411 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Gma11g01638 411 PANTHER - 1 411 - -
Gma11g01638 411 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 2 1 411 - -
Gma11g01638 411 Gene3D - 84 155 - -
Gma11g01638 411 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Gma11g01638 411 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Gma11g01638 411 SMART DRBM_3 2 69 IPR014720 -
Gma11g01638 411 SMART DRBM_3 88 154 IPR014720 -
Gma11g01638 411 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Gma11g01638 411 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Gma11g01638 411 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Gma11g01638 411 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Gma11g01638 411 Gene3D - 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01638 Gma-Chr11 17739622 17743494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01638 - - gmx:100816445 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01638 11 17739622 17743494 Gma11g01638 11 17739622 17743494 ECH
Gma12g00673 12 5882292 5885517 Gma11g01638 11 17739622 17743494 GST
Gma13g02900 13 43594280 43597076 Gma11g01638 11 17739622 17743494 PCT
Gma11g01638 11 17739622 17743494 Gma13g02900 13 43594280 43597076 PCT