Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02523 ATGAAGAACCGTTATTTGGTGCCGGAGAGACGGTGGTTCGTGGGTCTGGCCGTCGTGGGGTTGATCGGCGCGGTGCTATTCCTCAGCAACGCGATCCGAACCTCGGAAACCTCGTACGTGTGTCCGGGGGCGCTCGGGATCCGAAGCAAGACCCGAACCGAATTCAGTTACGACGCGTCACCGATCCAGCTCCGCGCGATTATGCACTACGCGACCTCGCGCGTGGTTCCGCAACAATCGGTGTCGGAGATCAAGATCAGTCTGGACGTCATTAAATCACTGGGCCGGCCCATCAACTTCCTCGTCTTCGGGCTGGGCCACGACTCCCTCATGTGGGCCTCGTTCAACCCGGGCGGCACCACGGTGTTCCTCGAAGAAGATCCAAAGTGGGTCCACTCGATCCTTAAAGACGCGCCTGGCCTGCGGGCCCACACGGTGCGTTACCGCACGCAGCTACGCGACGCCAAGGGGCTTATCACCTCGTACCGCTCCGAACCTTCGTGTTCTCCCACGAAGGCGTACCTGCGAGGCAACGAAGCGTGCAAGCTGGCGCTGGAGAATTTGCCCGACGAGGTTTACGAGACCGAGTGGGACATGATCATGATCGACGCGCCGAAGGGGTATTTCGCGGAGGCGCCGGGGAGGATGGCGGCGGTGTTCTCCGCCGCGGTGATGGCGAGGAACAGGAAGGGATCCGGTGTGACGCACGTGTTTTTGCATGACGTGGATCGGAAGGTGGAGAAGGTGTACGCCGAAGAGTTTCTCTGTAAAAAGAACTTGTTTGAGGTTTGGACGTGTAGTTATGTTACATGTTTGGAGGATACAACCAACCAGATCACTGTTCTTCATGGGATCATCACAACAGATTCACCAGCAGCAACAACAACCTCCTCTCCAAGAGAGGTTTCATGGTTTGCACCACCGGACAACGCTTTCAAACTCAATGTTGCCGGAGCTCACTTGGCCAGTAACCCAGGACCTTCAGGCTTTTGGGGCCTTCTCAGGAATAATTCTGCTGAATGGATAACAGGTTTCTCAGGATACTGTGGACATGCTACAAACCTGTATGCAGAACTCATGACCATTCTCCAGGGATTGCTGCTAGTTTGGGAGAAAGGTATTCGATTGCTCATTTGTGAGTCAGACTCTTCTTGA 1155 0.5558 MKNRYLVPERRWFVGLAVVGLIGAVLFLSNAIRTSETSYVCPGALGIRSKTRTEFSYDASPIQLRAIMHYATSRVVPQQSVSEIKISLDVIKSLGRPINFLVFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVRYRTQLRDAKGLITSYRSEPSCSPTKAYLRGNEACKLALENLPDEVYETEWDMIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKVYAEEFLCKKNLFEVWTCSYVTCLEDTTNQITVLHGIITTDSPAATTTSSPREVSWFAPPDNAFKLNVAGAHLASNPGPSGFWGLLRNNSAEWITGFSGYCGHATNLYAELMTILQGLLLVWEKGIRLLICESDSS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02523 384 Gene3D - 311 384 IPR036397 GO:0003676
Gma11g02523 384 SUPERFAMILY Ribonuclease H-like 314 383 IPR012337 -
Gma11g02523 384 CDD RNase_H_like 324 384 IPR044730 -
Gma11g02523 384 ProSiteProfiles RNase H type-1 domain profile. 308 384 IPR002156 GO:0003676|GO:0004523
Gma11g02523 384 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 261 - -
Gma11g02523 384 Pfam Polysaccharide biosynthesis 83 262 IPR021148 -
Gma11g02523 384 PANTHER OS11G0490100 PROTEIN 1 261 IPR006514 GO:0045492
Gma11g02523 384 Pfam Reverse transcriptase-like 316 383 IPR002156 GO:0003676|GO:0004523
Gma11g02523 384 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 65 262 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02523 Gma-Chr11 40363445 40365963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02523 - - gmx:100789499 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00057 18 464659 465632 Gma11g02523 11 40363445 40365963 GST
Gma11g02523 11 40363445 40365963 Gma05g01486 05 36750976 36752069 PCT
Gma11g02523 11 40363445 40365963 Gma08g00972 08 8204268 8206066 PCT
Gma05g01486 05 36750976 36752069 Gma11g02523 11 40363445 40365963 PCT
Gma08g00972 08 8204268 8206066 Gma11g02523 11 40363445 40365963 PCT