Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00972 ATGCAATTAGCGAATGAGAGAATGAAGAGCCGGTGGTTCGTGTGGCTTTTGGCGGTACTAGGCATCATCGGAGCCACACTCTTCATAGTGAGCTTGATCCAAACCTCGGAGAACAACTTCCTATGTTCCATAACAAGAACGATGCAGCAGCAGCAGCAGCAGTTCACCGATGGCCCCACATCGATGCAACTCAAAGCCATCCTCCACTACGCGACCTCTCAGATTGTCCCTCAACAATCTCTTTCCGAGATTACAATAACCTTCGACGTGCTCCAAAGCCTCCACCGCCCCGCCAACTTCCTCGTGTTTGGGCTGGGCCGCGATTCTCTCATGTGGGCCAGCCTCAACCCCCACGGCACCACGCTGTTCCTCGAGGAGGACCCTAAATGGTTCGGGATCGTCACCAAGGAGGCGCCCTACCTCCGGGCCCACACGGTCCGTTACCGGACACAGCTCCGAGAAGCCGACAGCCTCATGTCCTCGTACCGATCCGAACCCGCGTGTTTTCCGGCCACCGCCACGCTCCGCGGCAACGAGCGGTGCAAACTTGCCCTACATAACCTCCCTGACGAGGTTTATGAGAAGGAGTGGGATTTGATCATGATCGACGCGCCGAAGGGGTACTTTGCGGAGGCGCCGGGGCGCATGGCGGCGATATTCTCGGCGGCGGTGATGGCGAGGGACAGGAAGGGATCCGGTGTGACGCACGTGTTCTTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAGGAGTTTCTGTGTAGGAAGCACTTGGTCAAAGGTGTTGGGAGGCTCTGGCATTTCGAGATTCCTCCAATGGGTAATAACACTCGTGACTACGCACGTTTCTGTTAG 861 0.5679 MQLANERMKSRWFVWLLAVLGIIGATLFIVSLIQTSENNFLCSITRTMQQQQQQFTDGPTSMQLKAILHYATSQIVPQQSLSEITITFDVLQSLHRPANFLVFGLGRDSLMWASLNPHGTTLFLEEDPKWFGIVTKEAPYLRAHTVRYRTQLREADSLMSSYRSEPACFPATATLRGNERCKLALHNLPDEVYEKEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKHLVKGVGRLWHFEIPPMGNNTRDYARFC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00972 286 Gene3D Vaccinia Virus protein VP39 76 284 IPR029063 -
Gma08g00972 286 Pfam Polysaccharide biosynthesis 83 270 IPR021148 -
Gma08g00972 286 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 64 286 IPR006514 GO:0045492
Gma08g00972 286 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 11 286 - -
Gma08g00972 286 PANTHER OS11G0490100 PROTEIN 11 286 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00972 Gma-Chr8 8204268 8206066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00972 - - gmx:100820087 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00972 08 8204268 8206066 Gma08g00972 08 8204268 8206066 ECH
Gma05g01486 05 36750976 36752069 Gma08g00972 08 8204268 8206066 GST
Gma18g00057 18 464659 465632 Gma08g00972 08 8204268 8206066 PCT
Gma11g02523 11 40363445 40365963 Gma08g00972 08 8204268 8206066 PCT
Gma08g00972 08 8204268 8206066 Gma18g00057 18 464659 465632 PCT
Gma08g00972 08 8204268 8206066 Gma11g02523 11 40363445 40365963 PCT