Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01486 ATGAAGAGCCGATGGCTAGTGTGGCTATTGGCGATACTGGGCGTCATCGGAGCCACACTCTTCATAGCAAGCATGATCCAAACCTGGGAGAACAACTTCCTATGTTCCATAAGCAGAACCATGCAGCAGCAACAGTTCACCCACGGTCCCACATCGATGCAACTCAAGGCCATCCTCCACTACGCCACCTCGCAGGTTGTCCCTCAACAATCTCTCTCGGAGATCACCATAACCTTCGACGTGCTCCAGGCCCTCCACCGGCCCGCCAACTTCCTCGTCTTCGGGCTGGGCCGAGACTCGCTCATGTGGGCCAGCCTCAACCCGCACGGCACCACGCTGTTCCTCGAGGAGGACCCTAAGTGGTTCGGGATCGTCACCAAGGACGCGCCGAACCTCCTGGCCCACACGGTCCGTTACCGGACCCAGCTCCGAGACGCCGACAGCCTCCTCTCCTCGTACAGCTCCGAACCCGCGTGTTTTCCGGCGACCGCCACGCTCCGCGGCAACGAGCGTTGCAAGGTCGCCCTACACAACCTCCCTGACGAGGTGTATGCTAAAGAGTGGGATTTGATTATGATCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCGGGGCGCATGGCGGCGATATTCTCGGCGGCGGTGATGGCGAGGGACAGAAAAGGATCCGGTGTGACACACGTGTTTTTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAGGAGTTTCTGTGTAGGAAGCACTTGGTCAAAAGTGTTGGGAGGCTCTGGCACTTCCAGATTCCTCCCATGGGTAATCACACGAGTGATTACACACGCTTCTGTTAG 834 0.5863 MKSRWLVWLLAILGVIGATLFIASMIQTWENNFLCSISRTMQQQQFTHGPTSMQLKAILHYATSQVVPQQSLSEITITFDVLQALHRPANFLVFGLGRDSLMWASLNPHGTTLFLEEDPKWFGIVTKDAPNLLAHTVRYRTQLRDADSLLSSYSSEPACFPATATLRGNERCKVALHNLPDEVYAKEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARDRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKHLVKSVGRLWHFQIPPMGNHTSDYTRFC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01486 277 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 55 277 IPR006514 GO:0045492
Gma05g01486 277 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 277 - -
Gma05g01486 277 Gene3D Vaccinia Virus protein VP39 65 275 IPR029063 -
Gma05g01486 277 PANTHER OS11G0490100 PROTEIN 8 277 IPR006514 GO:0045492
Gma05g01486 277 Pfam Polysaccharide biosynthesis 74 261 IPR021148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01486 Gma-Chr5 36750976 36752069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01486 - - gmx:100786348 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01486 05 36750976 36752069 Gma08g00972 08 8204268 8206066 GST
Gma18g00057 18 464659 465632 Gma05g01486 05 36750976 36752069 PCT
Gma11g02523 11 40363445 40365963 Gma05g01486 05 36750976 36752069 PCT
Gma05g01486 05 36750976 36752069 Gma18g00057 18 464659 465632 PCT
Gma05g01486 05 36750976 36752069 Gma11g02523 11 40363445 40365963 PCT