Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02518 ATGGCAAAGACTGAGTTAGAGGTGACTGTTGAGAGCAAGAACAAAGAACTAAAGCACCTGGGATTTGTGAGGATTGCTGCTATTCAAACTTTTGTGATTGTGTCAAATCTGTATGAGTACGCAAAGCAGAATTCTGGGCCTTTGAGATCCGCTGTTGGAACGGTTGAGAACACTGTAACCACCGTTCTTGGTCCTGTCTGCAACAAATTCAAGGACTTCCCTGATGATGTCCTGGTTTATGTTGACAAAAAGGTGGATGAAGCTTCCCACAAGTTCGATGAGCATGCTCCTTCCTTTGCCAAGCACCTTGCGGATCAAGCCAAGGGTGTGATTCAGAAAGTGACTTGTGAGGCAGGGAAAGTTGCAAGTGAAGCTCAATCTGGGGGGTCAAGAGCTGCTGTTCATTTTGTTGCTACAGAGTCAAAGCATTTTGTGTTGATAAATTCGGTGAAGTTGTGGAATGGACTCACCCACTATCCACCATTCCATGCATTGGCAGAGATAGCAGTTCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTATAGTTTCATCGGGTATCTACCTTTGATTCCCATTGAAGAGATAGCCAAGGCATTCAAACAGGGAGAGGCGAACTTAAAAGGAGATAATGCAGCCTCTGAGGAACAAAGATTAGAATCTGCATCTGATTCTGATTAA 711 0.4473 MAKTELEVTVESKNKELKHLGFVRIAAIQTFVIVSNLYEYAKQNSGPLRSAVGTVENTVTTVLGPVCNKFKDFPDDVLVYVDKKVDEASHKFDEHAPSFAKHLADQAKGVIQKVTCEAGKVASEAQSGGSRAAVHFVATESKHFVLINSVKLWNGLTHYPPFHALAEIAVPTAAHWSEKYNHVIKAMTQKGYSFIGYLPLIPIEEIAKAFKQGEANLKGDNAASEEQRLESASDSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02518 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 236 IPR008802 -
Gma11g02518 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Gma11g02518 236 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02518 Gma-Chr11 40318022 40319560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02518 - - gmx:112935895 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00063 18 510197 511692 Gma11g02518 11 40318022 40319560 GST
Gma11g02518 11 40318022 40319560 Gma05g01484 05 36668579 36670509 PCT
Gma11g02518 11 40318022 40319560 Gma08g00968 08 8163954 8165226 PCT
Gma05g01484 05 36668579 36670509 Gma11g02518 11 40318022 40319560 PCT
Gma08g00968 08 8163954 8165226 Gma11g02518 11 40318022 40319560 PCT