Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00968 ATGATTAATGTTGTTTTGTTTGTGCAGAGGGATATGGAGAACAAGAAGAGTGAGGAAGAACTGAAGCATCTCGGGTTTGTGAAGATTGCGGCAATGAAAGCCTTAGTGTGTGTGTCGAATCTCTACGGCTTCGCAAAGCAAAACTCGGGACTTTTGAGATCTGCTGTTGGAACCGTGGAAGACACTGTAACCACCGTTCTGGGTCCCGTCTACCACAAATTCAACGCTGTTCCCAACCACATCCTCCTTTTTGTCGACAACAAGGTGGATGAAGCTGCTCACAAATTCGATGAGCATGCACCTTCTTTGGCCAAGCAGGTTGCAAGCCAAGTCACTTGTTTGGTTCAGGAAGTGACACACAAAGCTGAGAAAGTAGTGAGTGAAGCTCAATCTGGAGGGGCACGAGCAGCAGCAAATTATGTAGCCACTGAGTCCAAGCAAATTGTGCTCTTTGGTTCAGTGAAATTGTGGACTGGTCTCAACCACTATCCACCATTCCATGCAGTGGCTGAGATGGCAGTTCCCACAGCTGCACACTGGTCAGAAAAATACAACAATGTGGTCAAGGGAACAAGTGAGAAGGGTTATGCCGTGTTTGACTATTTGCCTCTGATTCCAATTGATGACATTGCTAAGGCGTTTAAACACGGAGAAGGCAATGTGAATGAAGATGAAGCATGTTCCGTGGGAGACTGTTCTTAG 702 0.4644 MINVVLFVQRDMENKKSEEELKHLGFVKIAAMKALVCVSNLYGFAKQNSGLLRSAVGTVEDTVTTVLGPVYHKFNAVPNHILLFVDNKVDEAAHKFDEHAPSLAKQVASQVTCLVQEVTHKAEKVVSEAQSGGARAAANYVATESKQIVLFGSVKLWTGLNHYPPFHAVAEMAVPTAAHWSEKYNNVVKGTSEKGYAVFDYLPLIPIDDIAKAFKHGEGNVNEDEACSVGDCS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00968 233 Pfam Rubber elongation factor protein (REF) 16 215 IPR008802 -
Gma08g00968 233 PANTHER RUBBER ELONGATION FACTOR PROTEIN 9 225 - -
Gma08g00968 233 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 9 225 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00968 Gma-Chr8 8163954 8165226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00968 - - gmx:100500275 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00968 08 8163954 8165226 Gma08g00968 08 8163954 8165226 ECH
Gma05g01484 05 36668579 36670509 Gma08g00968 08 8163954 8165226 GST
Gma18g00063 18 510197 511692 Gma08g00968 08 8163954 8165226 PCT
Gma11g02518 11 40318022 40319560 Gma08g00968 08 8163954 8165226 PCT
Gma08g00968 08 8163954 8165226 Gma18g00063 18 510197 511692 PCT
Gma08g00968 08 8163954 8165226 Gma11g02518 11 40318022 40319560 PCT