Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01484 ATGGCCACCACCTCGGAGAGGGATATGGAGAACAAGAGTGATCAAGAAGAACTGAAGCATCTTGGGTTTGTGAAGATTGCGGCAATTAAAGCCTTTGTGTGTGTGTCGAATCTCTACGACTTCGCAAAGCAAAACTCGGGACCTTTGAGATCTGCTGTTGGAACCGTGGAAGACACTGTAACCACCGTTCTGGGTCCCGTCTACCACCAATTCAAGGCTGTCCCCAACCACCTCCTCCTTTTTGCCGACAACAAGGTGGATGAAGCTGCTCACAAATTCGATGAGCATGCACCTTCTTTGGTTAAGCAGGTTGCAACCCAAGTCACTTGTTTGGTTCAGGAAGTGACACACAAAGCTGAGAAAGTAGTGAGTGAGGCTCAATCTGGAGGGGCACGAGCAGCAGCAAATTATGTAGCCACTGAGTCCAAGCAAATTGTGCTCTCTGGTTCGGTGAAATTGTGGACTGGTCTCAACCAATATCCACCATTCCATTCAGTGGCAGAGATGGCAGTTCCCCGAGCTGCACACTGGTCAGAAAAATACAACAATGTGGTAAAGGGAACGAGTGAAAAGGGTTTTGCCGTGTTTGGCTATTTGCCTCTGATTCCAATTGATGAGATAGCAACAGCGTTTAAACAGGGAGAAGGCAATGTGAATGAAGATGAAGCAGGTTCCGTGGCAGAGAGTTCTTAG 693 0.4791 MATTSERDMENKSDQEELKHLGFVKIAAIKAFVCVSNLYDFAKQNSGPLRSAVGTVEDTVTTVLGPVYHQFKAVPNHLLLFADNKVDEAAHKFDEHAPSLVKQVATQVTCLVQEVTHKAEKVVSEAQSGGARAAANYVATESKQIVLSGSVKLWTGLNQYPPFHSVAEMAVPRAAHWSEKYNNVVKGTSEKGFAVFGYLPLIPIDEIATAFKQGEGNVNEDEAGSVAESS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01484 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 6 223 IPR008802 -
Gma05g01484 230 PANTHER RUBBER ELONGATION FACTOR PROTEIN 6 223 - -
Gma05g01484 230 Pfam Rubber elongation factor protein (REF) 13 213 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01484 Gma-Chr5 36668579 36670509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01484 - - gmx:100499806 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01484 05 36668579 36670509 Gma08g00968 08 8163954 8165226 GST
Gma18g00063 18 510197 511692 Gma05g01484 05 36668579 36670509 PCT
Gma11g02518 11 40318022 40319560 Gma05g01484 05 36668579 36670509 PCT
Gma05g01484 05 36668579 36670509 Gma18g00063 18 510197 511692 PCT
Gma05g01484 05 36668579 36670509 Gma11g02518 11 40318022 40319560 PCT