Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02424 ATGGGCACCGTCACCTACAGCTACAAAATGTTCAAGTACTTCAACAGAAAATTCGACGTCTCCGAGCAGGCCCCTCCGCCGGACGTCAAGGAGGCCTTCTCCGCCTTCTCCCACGGCGCCGCCTCCTCCATGTCCGCCCACCAGCTCCTCCGCTTCCTGCACGACCACCAGCGTGAAACCGACTGCACCGCAGAGGATTCCAACCGCATCCTCGACAGCATCATTCAATCGCGCAAACAAACCAACGACACCAACTCCGAACGCCACCACTACCCCGACAACAACAAGAATGGGCTCACCCTCGACGAGTTCTTCCGTTTCTTGTTCCTTCTCGATTTCAACGATCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTACCTGACTGGGAATCAGCTGAGCAGCGTTTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGGGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATTGACGTAGTTCATGGAAGGACATTGACTACTCCTGTAGAGCTCATAAGATGTTTGAGGTCTATTAAGGATCATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACGCCAGATCTCCAGGCTAAAGTGGCTGAGATGGTTACTGAAACATTTGGAGACATACTATTTACTCCTAACTCAGAAAGTGTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAAGAGAATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAgaaaaggaaaaaggggatgattcacagcacgaaaaggagaaaggggatgattcacagcaTGGAAAGGCATTAGGCGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGTACTATAGAGGATTACAAGGACTACAATGTGGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATCAGACAAGTCACATCATAATGAAGCTCCAGAATATAGACGCCTAATTGCAATTCATGCTGGGAAGCCTAAAGGTGGATTAGCAGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCCATAAATCATGGACAACAAATTGTCAGGTTTACTCAGCGGAATATACTAAGGGTGTATCCAAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAAATTTTCTATTGGAGACTGGTCCAGATGACGAGGTCTTCAATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGCAAGGGTGACTGTATATATGGGGGAAGGATGGTACTATGATTTCAAGCATACACACTTTGATCAATATTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTATAATGAAGAGAACTAAGGCAATAGAGGATAACTGGTTACCTACATGGAATGAGGTATTCGAGTTCCCTCTCACTGTTCCGGAGTTGGCGTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAGCATGCCTACCTATCTGGGAGCTTAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGGGATAAATACAACACTGTAAAGCTTCTCATGCGCTTTGAATTTATTAATAATTGA 1860 0.4301 MGTVTYSYKMFKYFNRKFDVSEQAPPPDVKEAFSAFSHGAASSMSAHQLLRFLHDHQRETDCTAEDSNRILDSIIQSRKQTNDTNSERHHYPDNNKNGLTLDEFFRFLFLLDFNDPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSVCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTTPVELIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHGKALGEDEAWGKEVPSLKGGTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPEYRRLIAIHAGKPKGGLAECLKVDPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKARVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFEFINN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02424 619 Gene3D Phosphatidylinositol (PI) phosphodiesterase 119 480 IPR017946 GO:0006629|GO:0008081
Gma02g02424 619 SMART C2_3c 489 597 IPR000008 -
Gma02g02424 619 MobiDBLite consensus disorder prediction 270 321 - -
Gma02g02424 619 SMART plcy_3 350 467 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02424 619 CDD PI-PLCc_plant 122 454 - -
Gma02g02424 619 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Gma02g02424 619 SMART plcx_3 123 267 IPR000909 -
Gma02g02424 619 Pfam C2 domain 512 590 IPR000008 -
Gma02g02424 619 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 379 465 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02424 619 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 380 466 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02424 619 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
Gma02g02424 619 SUPERFAMILY PLC-like phosphodiesterases 123 468 IPR017946 GO:0006629|GO:0008081
Gma02g02424 619 SUPERFAMILY EF-hand 11 125 IPR011992 -
Gma02g02424 619 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 8 619 - -
Gma02g02424 619 MobiDBLite consensus disorder prediction 270 309 - -
Gma02g02424 619 CDD C2_PLC_like 491 616 - -
Gma02g02424 619 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 491 617 IPR035892 -
Gma02g02424 619 Gene3D - 24 116 - -
Gma02g02424 619 Gene3D C2 domain 484 619 IPR035892 -
Gma02g02424 619 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Gma02g02424 619 PRINTS Phospholipase C signature 405 426 IPR001192 GO:0035556
Gma02g02424 619 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Gma02g02424 619 PRINTS Phospholipase C signature 583 593 IPR001192 GO:0035556
Gma02g02424 619 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Gma02g02424 619 PRINTS Phospholipase C signature 426 444 IPR001192 GO:0035556
Gma02g02424 619 ProSiteProfiles C2 domain profile. 470 599 IPR000008 -
Gma02g02424 619 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 8 619 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02424 Gma-Chr2 50317742 50334864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02424 7 617 Acyl Lipid Metabolism Gene Families AT3G55940 61.798 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02424 K05857 - gmx:100037460 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00503 14 4800670 4805604 Gma02g02424 02 50317742 50334864 GST
Gma11g02322 11 38616601 38620929 Gma02g02424 02 50317742 50334864 PCT
Gma02g02424 02 50317742 50334864 Gma11g02322 11 38616601 38620929 PCT