Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01342 ATGAGAAAAAGCAACCACTTGATCGGTCTCTTAAACTTCCTAACATTCCTGCTGTCGATTCCGATCCTAGGAGGCGGGATATGGCTGAGCAGCAGGGCGAACAACACCGACTGCCTCAAGTTCCTGCAGTGGCCGCTCATCATCATCGGCGTCAGCATCATGGTCGTGTCCCTGGCGGGGTTCGCCGGCGCGTGTTACCGCAACACCTTCCTCATGCGGCTCTACCTCGTCGTCATGTTCCTGGTCATTGCCGTTCTGATCGGGTTCATCATATTCGCCTACGTTGTCACCGACAAGGGGTCCGGTCGGAGGGTGATGAACCGCGCTTACTTGGAGTATTATCTTGAGGACTATTCGGGGTGGTTGGAGGAGCGCGTGGCGAGTGATAGCTACTGGGGGAAGATTGTTTCGTGTGTTAGGGATTCTAAAGCATGTGGGAGGATGGGGATAACCATTAATGGGATGCCCGAGACTCCTGATATGTTCTACATCAGACATCTCACCCCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGCTATGTCTATCAGAATGAGACAGTGTGGATCCCAGGATCAGGATTGATGGGAGCCAACCCAGATTGCACAAGGTGGAGCAATGATCAAGAGCAGCTTTGCTATGCATGTGATTCTTGCAAGGCTGGTGTGCTGGCAAGTCTCAAGAAGAGTTGGAGGAAGGTCTCAGTGATCAACATTGTTGTTATGATCATCCTTGTCATTGTTTACATAATTGCTTATGCAGCTTATAGGAACAACCGCAAGATGGATAACGATGAGCCCTATGGTGAAGCAAGGATGACAAAGGCTCAACCTAGTGCCTTCCATCTTTAG 858 0.5058 MRKSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFLVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYYLEDYSGWLEERVASDSYWGKIVSCVRDSKACGRMGITINGMPETPDMFYIRHLTPIQSGCCKPPTDCGYVYQNETVWIPGSGLMGANPDCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVINIVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01342 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Gma11g01342 285 PRINTS Transmembrane four family signature 6 29 - -
Gma11g01342 285 PRINTS Transmembrane four family signature 39 65 - -
Gma11g01342 285 PRINTS Transmembrane four family signature 66 94 - -
Gma11g01342 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Gma11g01342 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01342 Gma-Chr11 11643261 11649994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01342 1 277 Miscellaneous Gene Families AT5G60220 73.285 9.86e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01342 - - gmx:100788977 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01342 11 11643261 11649994 Gma11g01342 11 11643261 11649994 ECH
Gma12g00642 12 5377353 5382718 Gma11g01342 11 11643261 11649994 GST
Gma13g02930 13 43855718 43859069 Gma11g01342 11 11643261 11649994 PCT
Gma11g01342 11 11643261 11649994 Gma13g02930 13 43855718 43859069 PCT