Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01139 ATGATGGGGAACAAGGTGCATGACATTGGTGTCACAGGAGTGATGATGAGTGCCTTAGTGTTGATGATGGTGTCAAAGGGTGTGAGAGCTCAAAACTGTGGGTGTGAGGCAGCAAATACGGGCACTGCCAAACCCAACGATGATGATTCCGTCGCCGACATCGTCACCCCCGAGTTCTTCAACGCCATAATTGATGAAGCAGAAGACCATTGTGCTGGCAAGAATTTCTACTCACGAGATGCCTTCCTTGATGCTCTCATTGCCTACAACCACTTTGCTAGGACTGCCTCTTCTTATGACTCCAAGCGTGAAATTGCAGCTGCTTTTGCTCATTTCACCCACGAAACCAGACGTTTTTGCTACTTAGGAGAGATTGAAGGTGCATCAAAGAACTATTGTGGCAAAACCACCAAGAAGTACCCGTGTGCCCATGACAAAGGTTACCATGGGCGTGAACCCATCCAACTATCATGGAACTTCAACTACGCATGGGAGAGCTGGATTGGATACGGTGGTGGCCAGTGA 525 0.4857 MMGNKVHDIGVTGVMMSALVLMMVSKGVRAQNCGCEAANTGTAKPNDDDSVADIVTPEFFNAIIDEAEDHCAGKNFYSRDAFLDALIAYNHFARTASSYDSKREIAAAFAHFTHETRRFCYLGEIEGASKNYCGKTTKKYPCAHDKGYHGREPIQLSWNFNYAWESWIGYGGGQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01139 174 ProSitePatterns Chitinases family 19 signature 1. 71 93 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma11g01139 174 CDD chitinase_GH19 55 169 - -
Gma11g01139 174 Gene3D - 52 170 - -
Gma11g01139 174 PANTHER ENDOCHITINASE EP3-LIKE 14 163 - -
Gma11g01139 174 SUPERFAMILY Lysozyme-like 50 164 IPR023346 -
Gma11g01139 174 Pfam Chitinase class I 54 163 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gma11g01139 174 PANTHER CHITINASE-RELATED 14 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01139 Gma-Chr11 9596047 9597659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01139 19 162 Glycoside Hydrolase AT3G54420 50.898 5.71e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01139 K01183 - gmx:100778526 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01139 11 9596047 9597659 Gma11g01139 11 9596047 9597659 ECH
Gma12g00441 12 3598327 3600089 Gma11g01139 11 9596047 9597659 GST
Gma13g03102 13 45255849 45257040 Gma11g01139 11 9596047 9597659 PCT
Gma11g01139 11 9596047 9597659 Gma13g03102 13 45255849 45257040 PCT