Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00729 ATGGCCATGACCGGTAACCATTCCCCTCGCCATTCCTCCGATAACCACCAATCGCGTCGCGCCACGCGCCTCCCTGCTTCTTCGCCGTGGAACCAGGTCGTCTGCGGCGAATCGGAGCCCGTTGCGGCGGTTCCGTCTTCCTCGACGGAGGATTTCCCCTCTGCCGCCGCGCCGGTGGAAGATTTTAGCTCCTCCGCGACTGAGAGCTCAGACAATGGCGGCGCTGCCAAGAGGCCTGTCTGGAACAAACCTTCTCCTAATGGCGCGGCGGCGGCGGCGGCTTCGGAGGTGAGGCCGGAGATGGACGCGAACTCGTGGCCCTTGCCGTCGGAGTCCACGAGAGCTGCTACGAAATCGGAATCCTTGAAGGGTCTGTTGGATGGATCTTCTGTGCCACAATCGCAGGGTTTGGGAAGTATGTCTTCTTCTTCCCCTTCACAGAGGGAAGTCAGTGATAATGCAAGCACCAACAGTGTGGTGCCGGCTCGGCAGAAATCAACAAAGCATCACAGTTCTAATGCATCTTCTAATGGTGGCCACATGCAACACTCTGCGTCCCAGGTTTCGATAGCTGCAACTGGGTCCCGAAACTCCTCTCCAAAGGACCACACACAAAGAAGTGGGTTTGCGTCTCATGATCATCCACAGCAGCGTAATTCGTTTAGAAATCGTAATGGCGGTCAACACCAGCGTGGAGATGGTTCTCACCATCATAACTATGGGAACAGGCATGATCAGGACTGGAATAATAATAGAACTTTTGGTAGTAGAGATACACATGTGCCACCAAGAGTTGTTCCAAGATTTATACGGCCGCCTCCACCTCCTAATTCTGCTCAGTTTTTTCATCCATCACCAATGCGGCCATTTGGTAGTCCCATTGGTTTCCATGAACTAGCACCTCAGCTGGTATTTGTTGCAGCTCCACCTCCACCCCCGGATTCACTAAGAGGTGTTCCTTTTGTGCCTCCTATGCCACATCATTCCCTGTTCTTTACAGGCCCAGATCCTCAGTTGCACAATaagatagtcaaccaggttgactactattttagTAATGAAAATTTAGTTAAAGATACATTCTTGCGGCAGAACATGGATGACCAGGGCTGGGTTCCCATAAAATTAATTGCAGGCTTCAACAAAGTTATGCATTTGACTGACAATATCCAAGTTATATTAGATGCTATTCGAACTTCATCTGTTGTTGAAGTGCAGGGTGACAAAATAAGGAGACGAAATGATTGGAGGAGATGGATCATGCATCCTCCTGTTCAGTTTTCTAATGCTACAACCATTGGAGTGTTGAATCCTGACATGCTGGCAGAACAAGTACACAATATTGCTCTGGAGACAAGTGACTATGATGGTGCAGGAGGACCGGATGTTCTACCAGATACTTCACGACATAGATCTACATTTAGGGATTTGCAGCTTTCCACTAGCGAGGGTCCTGGTCCTGGTCAAGTTGGTATTCAAGAGGCTCAGATCACTCCATTCCAGGAAGAAATTAGAGCTGTAAATGTGCTTTAG 1533 0.4886 MAMTGNHSPRHSSDNHQSRRATRLPASSPWNQVVCGESEPVAAVPSSSTEDFPSAAAPVEDFSSSATESSDNGGAAKRPVWNKPSPNGAAAAAASEVRPEMDANSWPLPSESTRAATKSESLKGLLDGSSVPQSQGLGSMSSSSPSQREVSDNASTNSVVPARQKSTKHHSSNASSNGGHMQHSASQVSIAATGSRNSSPKDHTQRSGFASHDHPQQRNSFRNRNGGQHQRGDGSHHHNYGNRHDQDWNNNRTFGSRDTHVPPRVVPRFIRPPPPPNSAQFFHPSPMRPFGSPIGFHELAPQLVFVAAPPPPPDSLRGVPFVPPMPHHSLFFTGPDPQLHNKIVNQVDYYFSNENLVKDTFLRQNMDDQGWVPIKLIAGFNKVMHLTDNIQVILDAIRTSSVVEVQGDKIRRRNDWRRWIMHPPVQFSNATTIGVLNPDMLAEQVHNIALETSDYDGAGGPDVLPDTSRHRSTFRDLQLSTSEGPGPGQVGIQEAQITPFQEEIRAVNVL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00729 510 MobiDBLite consensus disorder prediction 1 264 - -
Gma11g00729 510 MobiDBLite consensus disorder prediction 468 490 - -
Gma11g00729 510 MobiDBLite consensus disorder prediction 229 245 - -
Gma11g00729 510 SMART la 337 413 IPR006630 -
Gma11g00729 510 PANTHER ATP SYNTHASE, A SUBUNIT 1 509 - -
Gma11g00729 510 PANTHER LUPUS LA PROTEIN-RELATED 1 509 IPR045180 -
Gma11g00729 510 ProSiteProfiles La-type HTH domain profile. 333 422 IPR006630 -
Gma11g00729 510 CDD LAM 340 412 - -
Gma11g00729 510 SUPERFAMILY "Winged helix" DNA-binding domain 332 421 IPR036390 -
Gma11g00729 510 MobiDBLite consensus disorder prediction 106 228 - -
Gma11g00729 510 Gene3D - 334 420 IPR036388 -
Gma11g00729 510 MobiDBLite consensus disorder prediction 19 34 - -
Gma11g00729 510 Pfam La domain 343 398 IPR006630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00729 Gma-Chr11 6113585 6118051 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00729 K18757 - gmx:100811819 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00729 11 6113585 6118051 Gma16g01157 16 28774791 28778429 PCT
Gma11g00729 11 6113585 6118051 Gma02g00413 02 4222830 4226991 PCT
Gma16g01157 16 28774791 28778429 Gma11g00729 11 6113585 6118051 PCT
Gma02g00413 02 4222830 4226991 Gma11g00729 11 6113585 6118051 PCT