Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00413 ATGGCTATGAGCGGTGCGTCTTCCGATCATTCCCCCAAGCCCGGCGTCTCCTCGCCCTGGAGCCAGATTGTCGCCGCCGCTGCTCCTCCTTCCTCCACCTCCCCGCCGCCTCCACCCGTCGTCGACGCCTCCGTCGCGGTCAATTCTCCGCCGACGGAAGATTCTGACAACGGCGGCGGAAACAATGTCATTACCGGCAAAAGGCCTGCGTGGAATAAACCCTCGAATGCCGCTTCTTCTTCCGTCATTGGCGCCGATTCCTGGCCGCTGCCAGCGGAGTCCGCTCGCGCTCCGACCAAATCGCCGTCTCCGTCGCCATCGCCGTCCGAAATGACGAAGACTTCCACGGACATATCCTCCTTGCCGCCACCATTGCAGGGTTCTGGAAGCGTGACTCCCTCACCACAGAGGAATGTTAGGGATAATGCTAATGCGGACAACAACACTGTGCAGACTCACCAGAAGTCTTTTAAGCGCAGCAATTCGAACACCTCTTCTAATGGAGGGCATCATCCACCACAAATGTCTGGGCCTCAAGGTCCGATTGCTCCTGCTGGGTCCCACAACTATAATTCGTCACCAAAGGAGCATCAACCCAGAGCTGGATTTTTTCCTAATGATCACCTGCCACAGCGAAACTCTTTTAGGTACCGGAATGGCGGTGGTCCACATCAGCGCGGAGATGGTCACCACCATCATAACTATGGGGGCAGGCGTGATCAGGATCACCGTGGAAATCAGGACTGGAATAATCACCGAAGTTTTAATGGTAGAGACAACTTTATGTCTCCGAGATTTGGTCCAAGGTTTATAAGGCCTCCACTGCCTCCTAATCCTGCTCCATTGTTTCCACCACCTCCTCCATTGCACCCTTATGGGGGCTCTATTGGGTTTCCTGAACTACCTCCTCAGATGATATATGTTCCACCTCCGCCACTGGAATCAATGAGAGGTGTTCCTTTTGTTTCTCCAATACCGCCTAATGCAATGTTTTTCCAACCTTCAGATAATCAGTTGCATACTAAGATTGTCAACCAGATTGACTACTATTTCAGCAATGAAAATTTAGTTAAAGATATATACTTGCGGCGGAACATGGATGACCAGGGCTGGGTTACTATAAATTTAATAGCAGGCTTCAAAAAAGTCAAGTATTTGACCGAAAATATCCAGATTGTGTTAGATGCTGTTCGAACCTCATCTGTTGTTGAAGTTCAGGGTGACAAAATAAGGAGAAGAAATGATTGGAGGAGATGGATCATGCCTGGTGGTCAGGTTCCTAATGTTAGAGGTTCTCAAACCGTTGGACAGCTGGCTGAACGAGTTCAAAACATTACTCTGGAGAGAACTAACAATAACGATGCTGGAGTATTAGATGTTTCACAGAATAGACCTTTTGGGGATTTGAATAGTCAATATCTCCATTCCACTAGCGAGGGTACTGCTCAAGTCGAGGGAAGCAAGAAGCAGGAGGGATCATGGTCTCAATTTTTACATATTGCACAGTGGGACATGATTTCTCGTGAGGTATCTAGGAAAACATGA 1545 0.4919 MAMSGASSDHSPKPGVSSPWSQIVAAAAPPSSTSPPPPPVVDASVAVNSPPTEDSDNGGGNNVITGKRPAWNKPSNAASSSVIGADSWPLPAESARAPTKSPSPSPSPSEMTKTSTDISSLPPPLQGSGSVTPSPQRNVRDNANADNNTVQTHQKSFKRSNSNTSSNGGHHPPQMSGPQGPIAPAGSHNYNSSPKEHQPRAGFFPNDHLPQRNSFRYRNGGGPHQRGDGHHHHNYGGRRDQDHRGNQDWNNHRSFNGRDNFMSPRFGPRFIRPPLPPNPAPLFPPPPPLHPYGGSIGFPELPPQMIYVPPPPLESMRGVPFVSPIPPNAMFFQPSDNQLHTKIVNQIDYYFSNENLVKDIYLRRNMDDQGWVTINLIAGFKKVKYLTENIQIVLDAVRTSSVVEVQGDKIRRRNDWRRWIMPGGQVPNVRGSQTVGQLAERVQNITLERTNNNDAGVLDVSQNRPFGDLNSQYLHSTSEGTAQVEGSKKQEGSWSQFLHIAQWDMISREVSRKT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00413 514 MobiDBLite consensus disorder prediction 106 173 - -
Gma02g00413 514 PANTHER LUPUS LA PROTEIN-RELATED 16 486 IPR045180 -
Gma02g00413 514 MobiDBLite consensus disorder prediction 1 262 - -
Gma02g00413 514 MobiDBLite consensus disorder prediction 223 249 - -
Gma02g00413 514 PANTHER ATP SYNTHASE, A SUBUNIT 16 486 - -
Gma02g00413 514 SUPERFAMILY "Winged helix" DNA-binding domain 331 422 IPR036390 -
Gma02g00413 514 Pfam La domain 343 398 IPR006630 -
Gma02g00413 514 ProSiteProfiles La-type HTH domain profile. 333 422 IPR006630 -
Gma02g00413 514 SMART la 337 413 IPR006630 -
Gma02g00413 514 Gene3D - 332 420 IPR036388 -
Gma02g00413 514 MobiDBLite consensus disorder prediction 30 44 - -
Gma02g00413 514 MobiDBLite consensus disorder prediction 48 83 - -
Gma02g00413 514 CDD LAM 342 412 - -
Gma02g00413 514 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00413 Gma-Chr2 4222830 4226991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00413 K18757 - gmx:100819612 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01157 16 28774791 28778429 Gma02g00413 02 4222830 4226991 GST
Gma11g00729 11 6113585 6118051 Gma02g00413 02 4222830 4226991 PCT
Gma02g00413 02 4222830 4226991 Gma11g00729 11 6113585 6118051 PCT