Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00723 ATGTCGTCGGCGAAGAAAATCACGCTGAAGAGTTCGGACGGCGAGGCTTTCGAGGTGGAGGAGGCGGTGGCGCTGGAGTCGCAGACGATAAAGCACATGATCGAGGACGACTGCGCCGACAGCGGCATCCCTCTGCCGAACGTGACGAGCAAGATCCTGGCGAAGGTTATCGAGTACTGCAAGAAGCACGTCGAGGCCGCGAATCCCGAAGACAAACCCTCCGAGGACGATCTCAAGGCCTGGGACGCTGAATTCGTCAAGGTCGACCAGGCCACGCTCTTCGATCTCATCCTGGCTGCTAACTACTTGAACATCAAGAGCCTGCTGGACCTTACATGTCAAACTGTAGCCGACATGATCAAGGGGAAGACTCCAGAGGAAATTCGCAAGACCTTTAACATTAAGAATGACTTCACCCCTGAGGAGGAAGAGGAAGTTCGTCGGGAAAACCAATGGGCATTTGAATGA 468 0.5427 MSSAKKITLKSSDGEAFEVEEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAANPEDKPSEDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00723 155 PANTHER PUTATIVE-RELATED 1 155 - -
Gma11g00723 155 Pfam Skp1 family, tetramerisation domain 5 64 IPR016073 GO:0006511
Gma11g00723 155 SUPERFAMILY Skp1 dimerisation domain-like 78 153 IPR036296 GO:0006511
Gma11g00723 155 CDD BTB_POZ_SKP1 6 120 - -
Gma11g00723 155 PIRSF SCF_Skp 1 155 IPR016897 GO:0006511
Gma11g00723 155 Pfam Skp1 family, dimerisation domain 106 153 IPR016072 GO:0006511
Gma11g00723 155 PANTHER SKP1 1 155 IPR016897 GO:0006511
Gma11g00723 155 SUPERFAMILY POZ domain 5 65 IPR011333 -
Gma11g00723 155 SMART skp1_3 4 105 IPR001232 GO:0006511
Gma11g00723 155 Gene3D Potassium Channel Kv1.1; Chain A 1 155 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00723 Gma-Chr11 6083279 6084752 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00723 K03094 - gmx:100527683 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00723 11 6083279 6084752 Gma16g01161 16 28844160 28845799 PCT
Gma11g00723 11 6083279 6084752 Gma02g00416 02 4245030 4246593 PCT
Gma16g01161 16 28844160 28845799 Gma11g00723 11 6083279 6084752 PCT
Gma02g00416 02 4245030 4246593 Gma11g00723 11 6083279 6084752 PCT