Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00416 ATGGCTTCGACGAAGAAGATCACACTGAAGAGTTCGGACGGCGAGGCCTTCGAGGTGGAGGAGGCGGTGGCGGTGGAGTCCCAGACGATCAAGCACATGATCGAGGACAACTGCGCCGACAGCGGAATTCCTCTCCCCAATGTTACCAGCAAGATTCTGGCCAAGGTTATCGAGTATTGCAAGAAGCACGTTGAGGCCAATTGCGCTGATGAGAAGCCCAGTGAGGATGAACTCAAGGCTTGGGACGCTGATTTCGTCAAGGTTGATCAGGCCACACTCTTTGATCTCATTCTGGCTGCAAATTACTTGAATATCAAGAGCCTTTTGGACCTTACTTGCCAGACAGTAGCAGACATGATCAAGGGAAAGACTCCTGAGGAAATTCGCAAGACATTCAACATCAAGAATGACTTCACCCCTGAGGAAGAGGAGGAAGTTCGTAGGGAAAACCAATGGGCCTTTGAATGA 468 0.5021 MASTKKITLKSSDGEAFEVEEAVAVESQTIKHMIEDNCADSGIPLPNVTSKILAKVIEYCKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00416 155 PANTHER SKP1 1 155 IPR016897 GO:0006511
Gma02g00416 155 SUPERFAMILY POZ domain 5 66 IPR011333 -
Gma02g00416 155 CDD BTB_POZ_SKP1 6 120 - -
Gma02g00416 155 PANTHER PUTATIVE-RELATED 1 155 - -
Gma02g00416 155 Pfam Skp1 family, tetramerisation domain 5 64 IPR016073 GO:0006511
Gma02g00416 155 Pfam Skp1 family, dimerisation domain 106 153 IPR016072 GO:0006511
Gma02g00416 155 Gene3D Potassium Channel Kv1.1; Chain A 1 155 IPR011333 -
Gma02g00416 155 PIRSF SCF_Skp 1 155 IPR016897 GO:0006511
Gma02g00416 155 SMART skp1_3 4 105 IPR001232 GO:0006511
Gma02g00416 155 SUPERFAMILY Skp1 dimerisation domain-like 78 153 IPR036296 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00416 Gma-Chr2 4245030 4246593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00416 K03094 - gmx:100798104 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01161 16 28844160 28845799 Gma02g00416 02 4245030 4246593 GST
Gma11g00723 11 6083279 6084752 Gma02g00416 02 4245030 4246593 PCT
Gma02g00416 02 4245030 4246593 Gma11g00723 11 6083279 6084752 PCT