Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00365 ATGGCGTCTGTTTCAGCTTTAGCCAAGTACAAGCTCGTCTTCTTGGGTGACCAATCCGTGGGCAAAACCAGCATCATCACTCGCTTCATGTACGATAAATTCGATAACACCTATCAGGCTACAATTGGTATTGATTTTCTATCAAAAACTATGTATCTCGAAGATCGAACTGTTCGACTGCAGTTGTGggatacagctggccaggaaagatttagaagtcttattccaagctacattagggactcatctgtagctgttattgtatatgaTGTTGCAAGCCGGCAGACTTTCCTAAATACTGCAAAGTGGATTGAAGAGGTGCGAACAGAGAGAGGCAGTGATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTCGAGAAAAGGCAAGTCTCTACAGAGGAAGGGGAAGCTAAGTCTCGTGAACTGAACGTCATGTTTATTGAAGCTAGTGCCAAAGCTGGGTTTAATATAAAGGCCCTCTTTCGAAAAATTGCTGCTGCATTACCTGGAATGGAAACACTATCCTCCACAAAACAAGAAGATATGGTCGACGTGGACCTAAGATCTTTTGGTGGTTATCAATCTCAACCTCAGTCCGGCGGATCCGCGACAACCGCTCCCTTAAACTGCTCCGCAACAAGGCTAGTCGTCGCGCTGGAGGACAAGGCTACTGTGATTAAACATACGGAAGCTTTTACTCAGAGGTGTATATCTAGATGGTCCGTTACACTCTACGCTCGTTACTCTGATATTCCTCAGAACAAGTCTAAGCTTGCTCCTTTGCAGAGAAGAATGGTGGACCAGTGTAAAATGTTTGCAAAAGCAGGTGATGGAGGTAATGGTTGTTCTATCTTGCGCAAGGGAAGATCTGATGTTTGGGACTTCAGTGGTTTGCAGCATCACCTGATTGGTGACACTAATGGTGTCCGATAG 939 0.41 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVDLRSFGGYQSQPQSGGSATTAPLNCSATRLVVALEDKATVIKHTEAFTQRCISRWSVTLYARYSDIPQNKSKLAPLQRRMVDQCKMFAKAGDGGNGCSILRKGRSDVWDFSGLQHHLIGDTNGVR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00365 312 SMART rho_sub_3 12 172 IPR001806 GO:0003924|GO:0005525
Gma11g00365 312 ProSiteProfiles small GTPase Rho family profile. 3 176 - -
Gma11g00365 312 CDD Rab6 10 170 - -
Gma11g00365 312 SMART ras_sub_4 7 173 - -
Gma11g00365 312 ProSiteProfiles Obg domain profile. 265 312 IPR006169 -
Gma11g00365 312 SMART ran_sub_2 15 217 - -
Gma11g00365 312 Pfam Ras family 11 169 IPR001806 GO:0003924|GO:0005525
Gma11g00365 312 PANTHER DRAB5-RELATED 1 204 - -
Gma11g00365 312 SMART rab_sub_5 10 173 - -
Gma11g00365 312 Gene3D - 6 192 IPR027417 -
Gma11g00365 312 ProSiteProfiles small GTPase Ras family profile. 5 287 IPR001806 GO:0003924|GO:0005525
Gma11g00365 312 ProSiteProfiles small GTPase Rab1 family profile. 1 229 - -
Gma11g00365 312 PRINTS Transforming protein P21 ras signature 33 49 - -
Gma11g00365 312 PRINTS Transforming protein P21 ras signature 148 170 - -
Gma11g00365 312 PRINTS Transforming protein P21 ras signature 51 73 - -
Gma11g00365 312 PRINTS Transforming protein P21 ras signature 113 126 - -
Gma11g00365 312 PRINTS Transforming protein P21 ras signature 10 31 - -
Gma11g00365 312 PANTHER GTP-BINDING PROTEIN RAB6 1 204 - -
Gma11g00365 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 180 IPR027417 -
Gma11g00365 312 TIGRFAM small_GTP: small GTP-binding protein domain 9 166 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00365 Gma-Chr11 3007726 3016709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00365 K07893 - gmx:100527651 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00365 11 3007726 3016709 Gma11g00365 11 3007726 3016709 ECH
Gma01g02050 01 55850430 55854025 Gma11g00365 11 3007726 3016709 GST
Gma11g00365 11 3007726 3016709 Gma17g01387 17 12844540 12850213 PCT
Gma11g00365 11 3007726 3016709 Gma05g00648 05 7157354 7162502 PCT
Gma17g01387 17 12844540 12850213 Gma11g00365 11 3007726 3016709 PCT
Gma05g00648 05 7157354 7162502 Gma11g00365 11 3007726 3016709 PCT