Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00353 ATGTACAGAGAGCGAGGAGGCGTCGGATCCAAATCGGAGGTAACTTCCGTTGATCGGAAGCGAATCAATGACGTCCTCGATAAACAGCTCGAACGATCCTCGCCGTCCACATCCAGAGCCGCCGGCGCCATCAACGGCAAGGACCGCTCCTCCTCTTCCCTCTTAGCCGCCGCCAAGGACTCCCGCTCCGCCTCCGTCACCGCCCCTATCTCCAAGAATTCCAACGCTTCCGACGAGGAATCTGAAACAGACAGCGAGGAGTCTGATGTTAGTGGCTCCGACGGAGATGACACGTCGTGGATCTCGTGGTTCTGCAATTTGAGAGGAAATGAATTCTTCTGCGAGGTTGATGACGATTACATCCAGGACGACTTCAACCTCTGTGGATTGAGCAGTCAAGTGCCTTACTATGATTATGCTCTGGATTTGATTTTGGATGTTGAATCCTCTCATGGTGACATGTTTACCGAGGAACAGAATGAGTTAATTGAATCAGCAGCCGAGATGCTTTATGGTCTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCAATGCTCGACAAGTACAAGAACTATGATTTTGGCAGATGCCCACGAGTTTACTGCTCTGGACAACCTTGTATTCCAGTTGGTCAGTCAGACATCCCTAGGTCTAGTACTGTGAAAATATACTGCCCTCGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACGTTTCCTCATCTGTTCTTGATGACTTATGGACAACTAAAGCCACAGAAACCATCACAGAGCTATGTCCCGAGAGTTTTTGGCTTCAAACTTCACAAGCCCTGA 861 0.4866 MYRERGGVGSKSEVTSVDRKRINDVLDKQLERSSPSTSRAAGAINGKDRSSSSLLAAAKDSRSASVTAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00353 286 SUPERFAMILY Casein kinase II beta subunit 97 285 IPR035991 GO:0005956|GO:0019887
Gma11g00353 286 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 92 196 IPR016149 GO:0005956|GO:0019887
Gma11g00353 286 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 285 - -
Gma11g00353 286 MobiDBLite consensus disorder prediction 1 95 - -
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 99 115 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 116 130 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 171 192 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 196 217 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 218 239 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PRINTS Casein kinase II regulatory subunit family signature 246 263 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 Gene3D - 197 271 - -
Gma11g00353 286 MobiDBLite consensus disorder prediction 29 76 - -
Gma11g00353 286 SMART CK_II_beta_2 99 282 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 MobiDBLite consensus disorder prediction 14 28 - -
Gma11g00353 286 Pfam Casein kinase II regulatory subunit 99 282 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 ProSitePatterns Casein kinase II regulatory subunit signature. 200 231 IPR000704 GO:0005956|GO:0019887
Gma11g00353 286 PANTHER CASEIN KINASE II SUBUNIT BETA 1 285 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00353 Gma-Chr11 2822586 2825971 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00353 K03115 - gmx:100780095 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00353 11 2822586 2825971 Gma11g00353 11 2822586 2825971 ECH
Gma01g02063 01 56017533 56020015 Gma11g00353 11 2822586 2825971 GST
Gma11g00353 11 2822586 2825971 Gma05g00633 05 6841012 6843899 PCT
Gma05g00631 05 6804646 6808009 Gma11g00353 11 2822586 2825971 PCT