Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00631 ATGAATGATTACAAAGGAAGAGAAGGAGAAAGTAGCGTTGTTGTTGTTCGGAAGCGATTCAAGGAAAAGCAACAACCCTGTCCTTCCACAAGGCCCATCATCAACCAACAACACCGTCGCTCTGCTTCCCTCCCTAACACTCAATACGAGGAATCTGAAACAGATGTCGAAGTATCTGATGTTAGTGTTTCAGAAGGGGATGACACATCTTGGATCTCATGGTTTTGCAATTTGAGAGGAAATGAATTCTTTTGCGAAGTTGATGATGATTTCGTGCAAGATGATTTCAACCTCTGTGGATTAAGTAGTCAAGTGCCTTACTATGATTATGCACTTGATTTGATTTTGGATGTTGAGTCATCCCACGGAGACACGTTCACGGAGGACCAAAATGAGTTAATTGAATCTGCAGCAGAAATGCTTTATGGTCTGATTCATGCCCGATACATTTTGACAAGCAAAGGAATGGCTGCAATGCTTCACAAGTACAAAAACTACAACTTTGGCCGATGTCCAAGAGTTTTCTGCTCTGGACAACCCTGCCTTCCGGTTGGCCAGTCAGATGTTCCTAGGTCAAGTACTGTAAAGATATATTGCCCCAGGTGTGAAGACATGTACCACCCAAAGTCCAAGTATCAAGGTAACATTGATGGAGCTTATTTTGGAGCTACATTTCCTCACCTTTTTCTGATGACTTATGGGAATCTGAAGCCACAGAAGCAATCACAGAACTATGTACCTAGAGTTTTTGGTTTCAAAGTTCACAAGTCCTGA 774 0.4225 MNDYKGREGESSVVVVRKRFKEKQQPCPSTRPIINQQHRRSASLPNTQYEESETDVEVSDVSVSEGDDTSWISWFCNLRGNEFFCEVDDDFVQDDFNLCGLSSQVPYYDYALDLILDVESSHGDTFTEDQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYNFGRCPRVFCSGQPCLPVGQSDVPRSSTVKIYCPRCEDMYHPKSKYQGNIDGAYFGATFPHLFLMTYGNLKPQKQSQNYVPRVFGFKVHKS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00631 257 Gene3D - 168 242 - -
Gma05g00631 257 SUPERFAMILY Casein kinase II beta subunit 68 256 IPR035991 GO:0005956|GO:0019887
Gma05g00631 257 PANTHER CASEIN KINASE II SUBUNIT BETA-2 10 256 - -
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 70 86 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 87 101 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 142 163 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 167 188 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 189 210 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PRINTS Casein kinase II regulatory subunit family signature 217 234 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 Pfam Casein kinase II regulatory subunit 70 253 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 MobiDBLite consensus disorder prediction 19 55 - -
Gma05g00631 257 SMART CK_II_beta_2 70 253 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 ProSitePatterns Casein kinase II regulatory subunit signature. 171 202 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 PANTHER CASEIN KINASE II SUBUNIT BETA 10 256 IPR000704 GO:0005956|GO:0019887
Gma05g00631 257 MobiDBLite consensus disorder prediction 28 52 - -
Gma05g00631 257 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 63 167 IPR016149 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00631 Gma-Chr5 6804646 6808009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00631 K03115 - gmx:100789357 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00631 05 6804646 6808009 Gma05g00631 05 6804646 6808009 ECH
Gma05g00631 05 6804646 6808009 Gma01g02063 01 56017533 56020015 PCT
Gma05g00631 05 6804646 6808009 Gma11g00353 11 2822586 2825971 PCT