Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02063 ATGTACAGAGAGCGAGGAGGCGTCGGATCCAAATCGGAGGTAACTTCCGTTGATCGGAAGCGAATCAACGACGTCCTCGATAAACAGCTTGAACGTTCCTCGCCTTCCACATCCAGAGCCGCCGCCATCAACGGCAAGGACCGCTCCTCCTCTTCCCTCTTAGCCGCCGCCAAGGACTCCCGCTCCGCCTCCGTCACCGCCCCTATCTCCAAGAATTCCAACGCTTCCGACGAGGAATCTGAAACAGACAGCGAGGAGTCTGATGTTAGTGGCTCCGACGGAGATGACACATCGTGGATCTCGTGGTTCTGCAATTTGAGAGGAAATGAATTCTTCTGCGAGGTTGATGACGATTACATCCAGGACGACTTCAACCTGTGTGGATTGAGCAGTCAAGTGCCTTACTATGATTATGCTCTGGATTTGATTTTGGATGTTGAATCGTCCCATGGTGACATGTTTACCGAGGAACAGAATGAGTTAATTGAATCAGCAGCCGAGATGCTTTATGGTCTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCAATGCTGGACAAGTACAAGAACTATGATTTTGGCAGATGCCCACGAGTTTACTGCTCTGGACAACCTTGTATTCCAGTTGGTCAGTCAGACATCCCTAGGTCTAGTACTGTGAAAATATACTGCCCTAGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCTCATCTGTTCTTGATGACTTATGGACAACTAAAGCCACAGAAACCATCACAGAGCTATGTCCCGAGAGTTTTTGGCTTCAAACTTCACAAGCCCTGA 858 0.4814 MYRERGGVGSKSEVTSVDRKRINDVLDKQLERSSPSTSRAAAINGKDRSSSSLLAAAKDSRSASVTAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02063 285 PANTHER CASEIN KINASE II SUBUNIT BETA 1 284 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 SUPERFAMILY Casein kinase II beta subunit 96 284 IPR035991 GO:0005956|GO:0019887
Gma01g02063 285 MobiDBLite consensus disorder prediction 1 94 - -
Gma01g02063 285 SMART CK_II_beta_2 98 281 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 MobiDBLite consensus disorder prediction 29 75 - -
Gma01g02063 285 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 91 195 IPR016149 GO:0005956|GO:0019887
Gma01g02063 285 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 284 - -
Gma01g02063 285 Pfam Casein kinase II regulatory subunit 98 281 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 98 114 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 115 129 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 170 191 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 195 216 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 217 238 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 PRINTS Casein kinase II regulatory subunit family signature 245 262 IPR000704 GO:0005956|GO:0019887
Gma01g02063 285 Gene3D - 196 270 - -
Gma01g02063 285 MobiDBLite consensus disorder prediction 14 28 - -
Gma01g02063 285 ProSitePatterns Casein kinase II regulatory subunit signature. 199 230 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02063 Gma-Chr1 56017533 56020015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02063 K03115 - gmx:100799304 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02063 01 56017533 56020015 Gma01g02063 01 56017533 56020015 ECH
Gma01g02063 01 56017533 56020015 Gma11g00353 11 2822586 2825971 GST
Gma01g02063 01 56017533 56020015 Gma05g00633 05 6841012 6843899 PCT
Gma05g00631 05 6804646 6808009 Gma01g02063 01 56017533 56020015 PCT