Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00291 ATGCACAAGAGGAGTTCAGGTTCAGCATTGGGCCCAGGAGGCTTGGACCTAACTCAAGCCTTGTTCAAGTCCATCATGAACGCTGCACCTTCTTCTCCCACCAAGGACCACAACAAAATCTCCGTTGTTGGGGCAGGCAACGTGGGAATGGCCATAGCCCAAACCATCTCACTCAGGATCTCACCGACGACGATGAGATTCCTGACAAACACCACGGTGAGATGCTGGACCTCCAGCACGCCGCGGCCTTCCTCCCCGGCCATCTCCACACTCTTTGAGAAAATCATACCTCCTTTGGTCCGTTACTCCCCAGACACCATTCTTCTCATCGTTTCAAATCCCGTGGACGTGCTCACTTACGTGGCATGGAAGCTTTCGGGGTTCCCTTCAAACCACGTCATTGGCTATGGCACTAACTTGGACTCTTCCCGTTTTCGTTTCCTCATTGCTGATCATCTTGATGTCAACGCTCAAGATGTCCAGGCTTTTATAGTGGGGGAACATGGTGACAGCTCAGTGGTCTAG 525 0.5219 MHKRSSGSALGPGGLDLTQALFKSIMNAAPSSPTKDHNKISVVGAGNVGMAIAQTISLRISPTTMRFLTNTTVRCWTSSTPRPSSPAISTLFEKIIPPLVRYSPDTILLIVSNPVDVLTYVAWKLSGFPSNHVIGYGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00291 174 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 138 171 IPR022383 GO:0016616
Gma11g00291 174 Pfam lactate/malate dehydrogenase, NAD binding domain 91 135 IPR001236 GO:0016491
Gma11g00291 174 Gene3D - 86 137 - -
Gma11g00291 174 ProSitePatterns L-lactate dehydrogenase active site. 165 171 IPR018177 GO:0004459
Gma11g00291 174 SUPERFAMILY LDH C-terminal domain-like 136 174 IPR015955 GO:0003824|GO:0016616
Gma11g00291 174 Gene3D - 138 174 IPR015955 GO:0003824|GO:0016616
Gma11g00291 174 PANTHER L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) 90 173 - -
Gma11g00291 174 PANTHER L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) 1 57 - -
Gma11g00291 174 PANTHER L-LACTATE DEHYDROGENASE 1 57 - -
Gma11g00291 174 PANTHER L-LACTATE DEHYDROGENASE 90 173 - -
Gma11g00291 174 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 135 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00291 Gma-Chr11 2347984 2348606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00291 K00016 - gmx:100818856 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00291 11 2347984 2348606 Gma11g00291 11 2347984 2348606 ECH
Gma01g02117 01 56507161 56508958 Gma11g00291 11 2347984 2348606 GST
Gma11g00291 11 2347984 2348606 Gma17g01296 17 11636088 11638316 PCT
Gma11g00291 11 2347984 2348606 Gma05g00549 05 5414456 5417051 PCT