Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02137 ATGGATACCAAGGGGAGACTGGTTGCAGGGTCACATAACAGGAATGAGTTTGTTCTCATCAATGCTGATGAAACTGCAAGAGTGAATGCTGTTACAGAATTGAGTGGACAAATTTGTCAGATCTGTGGGGATGAGATAGAGGTTACTGTTGATGGTGAACCATTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGTAGACCTTGCTATGAGTATGAAAGGAGAGAGGGAAACAAAATTTGCCCTCAGTGCAAAACCATATACAAGCGCCTAAAGGGTAGTCCTAGAGTTGAGGGTGATGAGGAAGAAGAGGACATTGATGATTTGGAAAATGAGTTTGACATTGGAAGCAATATCAGGCATGACCCTCATCACGTTGCTGAGGCCTTGCTCTCGGCTCGCCTCAATGCTGCCCGTGGTTCACAAATGAACGCTCCAGGGATCACCACACCATCAGAGTTTGATGCAGCTTCTGTGGCGGCTGATATTCCTCTCCTGACATATGATCACGAGGATGTTGGGATTTCTGCTGATAAACATGCTTTAATTATTCCCCCATTCATGCATCATGGGAAACGGGTTCATCCAATGCCTCCTGATTCATCTGTGCCAGTTCAACCCAGACCTATGGATCCTAAAAAAGATTTAGCAGTTTATGGATATGGAAGTGTCGCATGGAAGGAACGAATGGAGGAATGGAAGAAAAGGCAGAATGAAAAAATTGAGGTGGTTAAGCATGAAGGGGGTAATGATGGTGGGAAAAATGGTGATGAGCTTGATGATCCAGATTTGCCAAAAATGGATGAAGGCAGACAGCCACTGTGGAGGAAGTTGCCAATTAGCCCAAGCAAGATTAATCCCTATCGAATTATAATAGTACTCCGGATTGCTGTTCTTGGTCTCTTTTTCCATTATAGAATTCTCCACCCGGTCAATGATGCATATGCATTGTGGCTAACATCAGTAATATGTGAAATCTGGTTTGCTGTGTCTTGGATTTTGGATCAGTTTCCCAAATGGTGCCCAATTGAGAGAGAAACATACCTTGATCGTTTGTCATCGAGGTATGAGAAAGAAGGAAAGCCATCTGAATTAGCTGATATAGACGTTTTTGTTAGTACAGTAGATCCTATGAAAGAACCTCCACTTATAACTGCAAATACAGTACTATCCATCCTTGCTGTAGATTATCCAGTGGAGAAAGTTTCATGTTATGTCTCAGATGATGGTGCAGCTATGCTGACATTTGAAGCCATTTCAGAGACTTCAGAGTTTGCAAGAAAGTGGGTTCCGTTCTGTAAGAAGTTCAACATTGAACCTCGGGCTCCTGAGTGGTATTTTGCTCAAAAGGTTGACTATCTGAAAGACAAAGTGGATGCAACATTCATCAGGGAGCGTCGTGCTATTAAGagggagtatgaagagttcaaagtgcgtatcaatgcattggttgcaatggcacaaaaggttcctgaggatggctggacaatgcaggatgggactccgtggcccgggaacagtgtcagagatcatcctggaatgattcaggttttccttggtcaaaatggtattcataatattgaagggaatgagttacctcgtcttgtctatgtgtcacgtgagaaaagaccaggatatgaacaccacaaaaaagctggtgctatgaatgccttagtgcgagtctcagcagtcatatcaaatgctccttacctactcaatgttgattgtgatcactacataaacaacagcaaagcacttcgtgaagccatgtgcttcatgatggatcctacatcagggaaaaaaatatgctatgtacaatttcctcaaagatttgatgggattgatcgtcatgatagatactcaaatagaaatgttgtattctttgatataaacatgaaaggtttagatggcatccaaggaccaatatatgtgggaactgggtgtgtctttaggcggcaggcgctctatggatatgatgcccctgctacgaagaaaccaccaaggaaaacctgtaactgttggcccaaatggtgctgcctgtgttgtggatctaggaacaagaataggaaagtgaagtcaggtccaagaaagaaaataaaaaacaaggatgctacaaagcaaatacatgcactagaaaatattgaagagggaattgaaggaattgacagtgagaagtcatggttaatgtcacaactaaaatttgagaaaaaatttgggcaatcagctgttttcatagcctcaacacTTATGGAAGATGGGGGTATTCTAAAAGGAGCAACTTCTGCATCACTCTTGAAAGAAGCCATTCATGTCATCAGTTGTGGTTATGAAGATAAGACAGAGTGGGGGAAAGAGGTTGGATGGATATATGGTTCTGTTACAGAAGATATATTAACAGGTTTCAAGATGCACTGTCATGGTTGGCGATCCGTGTACTGCATGCCTAAAAGGCCTGCTTTTAAGGGTTCTGCTCCCATAAATCTTTCAGATCGTCTGCATCAAGTTCTCCGTTGGGCACTTGGATCTGTTGAGATCCTGTTGAGTAAGCATTGTCCTATATGGTATGGATATGGTTGTGGCTTGAAATGGCTGGAGCGTTTTTCTTACATAAACTCGGTCATTTATCCTTTGACATCACTTCCCTTAATTGCCTATTGCACCTTGCCGGCTGTCTGTCTTCTCACTGGAAAGTTCATAGTCCCTGAGATTAGCAACTATGCCAGTATCATTTTCATGGCACTCTTCATCTCCATAGCTGTGACTAGCATCCTTGAAATGCAGTGGGGAGGTGTTGGCATACATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGTGGTGCCTCCTCACACCTCTTTGCTCTCTTCCAGGGTTTGCTCAAGGTTCTGGCAGGAGTTAACACAAACTTCACAGTCACATCAAAAGCTGCGGACGGCGGAGACTTTGCTGAACTCTACCTCTTCAAGTGGACATCATTGTTGATCCCTCCTTTGACCTTGCTCATCATAAACATAATAGGAGTTATTGTAGGTGTTTCAGATGCAATAAACAACGGCTATGATTCATGGGGTCCCCTATTTGGTAAGCTATTTTTTGCTCTTTGGGTCATTGTCCATCTTTACCCCTTCCTCAAGGGAGTCATGGGAAAACAGGAAGGTGTTCCCACCATCATTTTGGTTTGGGCTATTCTTCTGGCTTCAATCTTCTCACTTCTGTGGGGTTTTAGTTCAGTGCCTCCATTCGGGACTGTAACTAGCCGCAGCACGAGGAGCAGCCTCAGGAGGAGAAGGATGTCTCACAGGAAGTTCGAGCACCCAAGGCACGGTTCACTGGGATTTCTTCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCATTCCCCAAGGATGACCCATCCAAGGCACCCAAGCTCACTGCATTCTTGGGTTACAAGGCCGGTATGACTCACATTGTTAGAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATTATTGAGACCCCTCCAATGGTTATTGTTGGTGTTGTGGGTTATGTGAAAACTCCACGTGGTCTCCGAACATTGAACACTGTCTGGGCTCAGCATTTGAGTGAGGAATTGAAACGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCCTTCACCAAGTACTCTAAGCAGTATGAAACTGAGGAGGGAAAGAAAAACATTGAGGCGCAGCTGGAGAAACTGAAGAAGTATGCTACTGTGGTTCGTGTTTTGGCTCACACTCAGATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATATCATGGAAATTCAGGTTAATGGTGGTAGTATTGCACAAAAGGTGGACTTTGCATACAGTTTCTTTGAGAAACAGGTTCCTATTGATGCAGTGTTCCAGAAGGATGAGATGATTGACATCATTGGTGTGACCAAGGGTAAAGGTTATGAGGGTGTTGTCACTCGTTGGGGTGTTACCCGCCTTCCCCGTAAGACTCACAGAGGTTTGAGGAAGGTTGCTTGTATTGGTGCCTGGCATCCTGCAAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACCGAACTGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGAGATGAATCTCACTCTGCTCTTACTGAGTTTGATAGGACCGAGAAAGACATTACCCCAATGGGTGGTTTCCCTCACTATGGTGTTGTTAAGGATGATTTTATCATGGTCAAGGGATGCTGTGTTGGTCCCAAGAAGAGGGTCATTACATTGCGTCAATCCCTCCTTAAGCAGACTTCTCGTGTTGCTCTTGAGGAGATCAAACTCAAGTTTATCGATACCTCTTCAAAGTTTGGGCATGGTCGCTTCCAGACCACACAGGAGAAGCAGAAGTTCTTTGGACGCCTCAAAGCATAA 4461 0.3643 MDTKGRLVAGSHNRNEFVLINADETARVNAVTELSGQICQICGDEIEVTVDGEPFVACNECAFPVCRPCYEYERREGNKICPQCKTIYKRLKGSPRVEGDEEEEDIDDLENEFDIGSNIRHDPHHVAEALLSARLNAARGSQMNAPGITTPSEFDAASVAADIPLLTYDHEDVGISADKHALIIPPFMHHGKRVHPMPPDSSVPVQPRPMDPKKDLAVYGYGSVAWKERMEEWKKRQNEKIEVVKHEGGNDGGKNGDELDDPDLPKMDEGRQPLWRKLPISPSKINPYRIIIVLRIAVLGLFFHYRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSSRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVSCYVSDDGAAMLTFEAISETSEFARKWVPFCKKFNIEPRAPEWYFAQKVDYLKDKVDATFIRERRAIKREYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNSVRDHPGMIQVFLGQNGIHNIEGNELPRLVYVSREKRPGYEHHKKAGAMNALVRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPATKKPPRKTCNCWPKWCCLCCGSRNKNRKVKSGPRKKIKNKDATKQIHALENIEEGIEGIDSEKSWLMSQLKFEKKFGQSAVFIASTLMEDGGILKGATSASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSKHCPIWYGYGCGLKWLERFSYINSVIYPLTSLPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMALFISIAVTSILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADGGDFAELYLFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWGFSSVPPFGTVTSRSTRSSLRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALTEFDRTEKDITPMGGFPHYGVVKDDFIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02137 1486 Pfam Cellulose synthase 368 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma10g02137 1486 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 519 664 IPR029044 -
Gma10g02137 1486 Pfam Ribosomal protein L3 1098 1467 IPR000597 GO:0003735|GO:0005840|GO:0006412
Gma10g02137 1486 Gene3D Translation factors 1141 1482 - -
Gma10g02137 1486 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Gma10g02137 1486 ProSitePatterns Ribosomal protein L3 signature. 1309 1332 IPR019926 -
Gma10g02137 1486 PANTHER CELLULOSE SYNTHASE 1 1074 - -
Gma10g02137 1486 SUPERFAMILY Translation proteins 1101 1467 IPR009000 -
Gma10g02137 1486 CDD mRING-HC-C4C4_CesA_plant 37 86 - -
Gma10g02137 1486 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1074 - -
Gma10g02137 1486 Gene3D - 1180 1304 - -
Gma10g02137 1486 Gene3D Ribosomal protein L3, domain 3 1098 1371 IPR044892 -
Gma10g02137 1486 MobiDBLite consensus disorder prediction 246 266 - -
Gma10g02137 1486 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Gma10g02137 1486 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Gma10g02137 1486 SUPERFAMILY RING/U-box 27 107 - -
Gma10g02137 1486 SUPERFAMILY Nucleotide-diphospho-sugar transferases 381 895 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02137 Gma-Chr10 48858904 48869951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02137 1 1073 Glycosyltransferase AT5G64740 78.313 0.0 1733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02137 K10999 - gmx:100806786 2854.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02137 10 48858904 48869951 Gma10g02137 10 48858904 48869951 ECH
Gma16g01486 16 34115465 34124450 Gma10g02137 10 48858904 48869951 PCT
Gma02g00728 02 7013959 7022505 Gma10g02137 10 48858904 48869951 PCT
Gma10g02137 10 48858904 48869951 Gma16g01486 16 34115465 34124450 PCT
Gma10g02137 10 48858904 48869951 Gma02g00728 02 7013959 7022505 PCT