Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00728 ATGGACACCAAAGGGAGATTAGTTGCTGGGTCTCATAACAGGAATGAGTTTGTTCTTATCAATGCTGATGAAACTGCAAGAGTAGCTGTCACAGAATTAAGTGGTCAAATTTGTCAGATCTGTGGGGATGAGCTGGAGGTTACTGTGAATGGGGAGCCATTTGTTGCTTGCAATGAATGTGCGTTCCCTGTGTGCAGACCTTGCTATGAGTATGAAAGAAGAGAGGGTAACCAAGTTTGTCCTCAGTGTAAAACCAGATATAAGCGCATCAAAGGTAGTCCTAGAGTTGAGGGTGATGAAGAAGAGGATGATAGTGATGATTTGGAAAGTGAGTTTGATATTGGGAGCGTGTTCTCTGCTCGCCTTAACTATGGTTCACAGGTGAATGGTTCGGTGATCCATGCACCATCGGAGTTTGATGCAGCTTCCGTGGCTTCTGAGATCCCTCTCTTGACATATGGTCAAGAGGATGTTGGCATTTCTGCTGATAAACATGCTCTTATTCTTCCTCCATTCACGGCCAGAGGGAAACGAGTTCATCCCATGCCTTTTCCTGATTCATCTGTACCTGTTCAACCAAGACCTATGGATCCTAAAAAGGATATTGCAGTTTATGGATATGGAAGTGTTGCATGGAAGGAACGGATGGAGGATTGGAAGAAAAAACAAAGTGAAAAACTTCAGGTTGTTAGACATGAAGGGGGTAAAGATAGTGATGAGCTGGATGATCCTGACTTACCAAAAATGGATGAAGGCAGACAACCACTTTGGAGAAAGTTGCCAATTAGTTCAAGCAGGATAAATCCATACAGAATCATAATAGTACTTCGGATTGCAATTCTTTGCCTCTTTTTTCATTATAGAATCCTCCATCCAGTCAATGATGCATACGCATTGTGGCTCACCTCAGTAATATGTGAAATCTGGTTTGCTGTCTCATGGATTTTTGATCAGTTCCCAAAATGGAGCCCAATTCTTAGAGAAACATACCTTGATCGTTTATCTCTAAGATATGAAAAAGAAGGAAAGCCATCTCTGTTAGCTGATATAGACGTGTTCGTTAGTACAGTGGACCCTATGAAGGAACCTCCACTCATTACTGCAAACACAGTTCTGTCTATCCTTGCTGTGGATTATCCAGTGGACAAGGTTGCATGCTATGTTTCAGATGATGGAGCTGCCATGCTTACATTTGAAGCACTTTCCGAGACTTCTGAGTTTGCAAGGAAATGGGTTCCATTCTGCAAGAAGTTCTGCATTGAACCACGGGCTCCTGAATGGTATTTTGCTCAGAAGGTTGACTACTTGAAGGATAAAGTGGATGCAACATTTATAAGAGAACGTCGTGCCATTAAGagggagtatgaagagttcaaagtgaggattaatgcattggtggctttggcacaaaaggttcctgaggatggttggacaatgcaggatggtactccatggcctgggaacaatgtcagagatcatcccggaatgatacaagttttccttggtcaaaatggtgttcgtgacatcgaaggaaatgaattacctcgtcttgtctatgtgtctcgtgagaaaagacctggatatgatcaccacaaaaaagctggagctatgaatgctttggtgagagtctcggcaataatcaccaatgctccttatgtactgaatgttgattgtgatcactacataaataacagtaaggcccttcgtgaagccatgtgcttcatgatggatcctacatcagggaaaaaaatatgctacgtacagtttcctcaaagatttgatgggattgatcgtcatgatagatactcgaatcgcaatgttgtattctttgatatcaatatgaaaggtttagatggcatccaaggaccaatatatgtgggaactgggtgtgtcttcaggagacaggcattctatggatatgatgcccctacatcgaagaaagcaccaagaaagacatgtaactgttggcctaaatggtgctgctgtctgtgttgtggatctaagaagaaaaagattaaagcaaagtcaagtgtgaaaaagaagataaagaataaggatgatataaagcaaatgcatgcactagaaaatattgaagagggaattgaaggaattgacaatgagaagtcatcactaatgtctcaatcgaagtttgagaagaagtttgggcaatcatctgttttcatagcttcgacactctTGGAAGATGGGGGTGTTCCAAAAGCAGCAAGTTCTGCTACACTCTTGAAAGAGGCCATCCATGTAATTAGTTGTGGTTATGAAGATAAGACAGAATGGGGGAAAGAGGTTGGGTGGATATATGGCTCAGTTACCGAAGATATTTTAACAGGTTTCAAGATGCATTGTCATGGTTGGAGATCTGTATACTGCATGCCAAAAAGGCCTGCTTTTAAAGGTTCAGCTCCTATAAATCTCTCGGATCGTCTGCATCAAGTTCTTCGGTGGGCTCTTGGATCTGTTGAGATCTTTTTCAGTAGGCATTGTCCCATATGGTATGGCTATGGTGGCGGCTTGAAATCGCTGGAACGATTCTCTTACATAAACTCAGTTGTTTATCCTCTGACTTCAATTCCCTTAATTGCCTATTGTGCATTGCCAGCTGTCTGTCTGCTCACTGGGAAGTTCATTGTCCCCGAGATAAGTAACTATGCCAGTATCATTTTCATGGCCCTCTTCATCTCTATAGCTGCAACTGGCATCCTGGAAATGCAGTGGGGAGGTGTCGGTATACATGACTGGTGGAGGAACGAGCAGTTCTGGGTCATTGGTGGTGCCTCCTCACATCTCTTTGCTCTCTTTCAGGGTTTGCTCAAAGTTCTGGCGGGAGTCAACACAAACTTCACAGTCACATCCAAGGCAGCAGATGATGGAGAGTTTGCTGACCTCTACATCTTCAAGTGGACATCCTTGTTGATCCCTCCCTTGACCCTACTAATCATAAACATCATCGGAGTCATTGTCGGTGTCTCGGATGCTATAAACAATGGATATGATTCATGGGGTCCTTTGTTTGGGAGGCTATTTTTTGCCCTTTGGGTCATTGTACACCTTTACCCTTTCCTCAAGGGTGTCATGGGAAAACAAGAAGGTGTTCCTACCATCATTTTGGTCTGGGCTATTCTCCTGTCTTCAATCTTAACCCTACTTTGGGTGAGAATCAACCCATTCTTGGCCAAAAGTGATGTGGTGTTGGAAATTTGTGGATTGAATTGTGACTAA 3237 0.3216 MDTKGRLVAGSHNRNEFVLINADETARVAVTELSGQICQICGDELEVTVNGEPFVACNECAFPVCRPCYEYERREGNQVCPQCKTRYKRIKGSPRVEGDEEEDDSDDLESEFDIGSVFSARLNYGSQVNGSVIHAPSEFDAASVASEIPLLTYGQEDVGISADKHALILPPFTARGKRVHPMPFPDSSVPVQPRPMDPKKDIAVYGYGSVAWKERMEDWKKKQSEKLQVVRHEGGKDSDELDDPDLPKMDEGRQPLWRKLPISSSRINPYRIIIVLRIAILCLFFHYRILHPVNDAYALWLTSVICEIWFAVSWIFDQFPKWSPILRETYLDRLSLRYEKEGKPSLLADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFCIEPRAPEWYFAQKVDYLKDKVDATFIRERRAIKREYEEFKVRINALVALAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGYDHHKKAGAMNALVRVSAIITNAPYVLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQAFYGYDAPTSKKAPRKTCNCWPKWCCCLCCGSKKKKIKAKSSVKKKIKNKDDIKQMHALENIEEGIEGIDNEKSSLMSQSKFEKKFGQSSVFIASTLLEDGGVPKAASSATLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGYGGGLKSLERFSYINSVVYPLTSIPLIAYCALPAVCLLTGKFIVPEISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFADLYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLSSILTLLWVRINPFLAKSDVVLEICGLNCD 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00728 1078 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 878 IPR029044 -
Gma02g00728 1078 PANTHER CELLULOSE SYNTHASE 3 1077 - -
Gma02g00728 1078 SUPERFAMILY RING/U-box 29 106 - -
Gma02g00728 1078 Pfam Zinc-binding RING-finger 31 104 IPR027934 -
Gma02g00728 1078 Pfam Cellulose synthase 350 1068 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma02g00728 1078 Coils Coil 694 714 - -
Gma02g00728 1078 MobiDBLite consensus disorder prediction 227 252 - -
Gma02g00728 1078 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 111 IPR013083 -
Gma02g00728 1078 CDD mRING-HC-C4C4_CesA_plant 36 86 - -
Gma02g00728 1078 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 496 644 IPR029044 -
Gma02g00728 1078 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 1077 - -
Gma02g00728 1078 ProSiteProfiles Zinc finger RING-type profile. 38 84 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00728 Gma-Chr2 7013959 7022505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00728 1 1077 Glycosyltransferase AT5G64740 78.875 0.0 1766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00728 K10999 - gmx:100795809 2094.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01486 16 34115465 34124450 Gma02g00728 02 7013959 7022505 GST
Gma02g00728 02 7013959 7022505 Gma10g02137 10 48858904 48869951 PCT
Gma10g02137 10 48858904 48869951 Gma02g00728 02 7013959 7022505 PCT