Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01501 ATGTCTCAAACCCTCGGTTCCGATgagccaccccaaaccaccgattcccacaccccctccctcctccacctctccttcaaccaggactccggttgcttcgccgccgccaccgaccgcggcttccgcatctataactgcgaccccttccgcgagatcttccgccacgacttcggctccggcggcggtggcgtcgCCCTCGTCCACATGCTCTTCCGCTGCAACATCCTCGCCTTCGTCGGCGCCTCCTCCTCCTCCTCCTCCTCCGAACCCCGCTATCCTCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAAGTTAAAGGCGTCCGTCTCCGCCGCGACCGAATCGTCGTCGTCCTCGCCCACAAGATCTTCGTCTACAACTTCTCCGATCTCAAGGTGCTGCACCAAATTGAGACGATTGTAAACCCTAAGGGCCTTTGCGACCTTTCACATGTTTCCGCCACGATGGTGTTGGTGTGCCCCGGGTTGCAGAAGGGGCAGGTTAGGGTTGAGCACTACGCTTCCAAGAGGACCAAGTTCATCATGGCTCATGATTCCCGAATCGCGTGTTTTGCACTCACGCACGATGGGAGGTTGCTTGCCACCGCCAGCTCCAAGGGCACACTCGTTAGGCTCTTCAATACCCTCGACGGTTCACTGCTCCAAGAGGTACGGCGGGGTGCAGACAGAGCAGAGATATACTGCCTTGCTTTTTCTCCTACTGCGCAGTGGCTGGCTGTCTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTCAAGGTAGATTCCGGACTGTTGGGGCATGACAGATCACATGGTACTTCTGAGGCAAATCCTTCTAGCCCCACTGCGGTTTCATCTCTTTCCTTTTTTAAAGGTGTGCTGCCTAAGTATTTTAGCTCAGAGTGGTCTGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAATATGTTGTTGCATTTGGCCATCAAAAGAATACAGTTGTAATACTAGGCATGGATGGCAGCTTCTATCGATGTCAGTTTGATTCTGCTGCCGGTGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGGCAGAGGAGACATTCTAG 1131 0.4474 MSQTLGSDEPPQTTDSHTPSLLHLSFNQDSGCFAAATDRGFRIYNCDPFREIFRHDFGSGGGGVALVHMLFRCNILAFVGASSSSSSSEPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFSDLKVLHQIETIVNPKGLCDLSHVSATMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLVRLFNTLDGSLLQEVRRGADRAEIYCLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGHDRSHGTSEANPSSPTAVSSLSFFKGVLPKYFSSEWSVAQFRLQEGLQYVVAFGHQKNTVVILGMDGSFYRCQFDSAAGGEMTQLEYYNFLKAEETF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01501 376 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g01501 376 Gene3D - 190 365 IPR015943 GO:0005515
Gma10g01501 376 Gene3D - 4 189 IPR015943 GO:0005515
Gma10g01501 376 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 7 376 - -
Gma10g01501 376 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 7 376 - -
Gma10g01501 376 SUPERFAMILY WD40 repeat-like 11 272 IPR036322 GO:0005515
Gma10g01501 376 SMART WD40_4 186 226 IPR001680 GO:0005515
Gma10g01501 376 SMART WD40_4 7 45 IPR001680 GO:0005515
Gma10g01501 376 SMART WD40_4 229 270 IPR001680 GO:0005515
Gma10g01501 376 Pfam WD domain, G-beta repeat 239 270 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01501 Gma-Chr10 42124108 42127600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01501 K22991 - gmx:100800215 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01501 10 42124108 42127600 Gma20g02203 20 49142156 49145692 ECH
Gma10g01501 10 42124108 42127600 Gma10g01501 10 42124108 42127600 ECH
Gma10g01501 10 42124108 42127600 Gma20g02203 20 49142156 49145692 GST
Gma19g01466 19 43881792 43888307 Gma10g01501 10 42124108 42127600 PCT
Gma03g01403 03 40156394 40159658 Gma10g01501 10 42124108 42127600 PCT