Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01403 ATGTCAGTTGCACCAGTTGACGGTATTCCCTCATTAAACAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCTAGTGCAGCATGTACTTGTGCAGCGCTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAACGTATGTTCCTCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCACTTATTGTAAACAAGGAGGTTGTAGGGTATCAACCAAACAACTATCTCGAGTACCCGGACAATTGGACTGAAGCTGAATATTATGGGGACATGAATGAATCTGAAAGCATCTCTCCATCAGATTTTGTTTCTATAGTAGATATTAGGTTCAAGGGGAAACCAATCTGTTCCAAAGTTCTGTGGGGAATTCCAAATGCAAATGGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATATTCTCACTTATGCAGATAGAGATGATAACAATGATGGAGCGGTTCACCTTTCTGTATCTGATGGTCTGCCACCAATTACATCCTTGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAACTCCGTGAAGGGCTCCAGCTTAGTTGGATTATAGTAAACAGGAAAATAAAGCAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGTCAAAGACACTGGCCAACCGATAAGGATTTTGTTATCCGCTTTGGATCAGTTCTACCCGCCAAGGACATTCTTCCTTGTCAGGTAGCAGAGTGTATCCTTATTATGAAGTTTAGAGTGATTCACACTGAAGAAGATGGGTTTCAAACAACTCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCTTATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTCGAGTCTTGTCATATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTCGGTTGGACAGACTTTGTATTTTAAGTGGCATTGCAGCATTTATGACGTTCTGGTACTGTGTTTTATGA 1122 0.4127 MSVAPVDGIPSLNSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPLIVNKEVVGYQPNNYLEYPDNWTEAEYYGDMNESESISPSDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDNNDGAVHLSVSDGLPPITSLERERKDGKLWRELREGLQLSWIIVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVAECILIMKFRVIHTEEDGFQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01403 373 Gene3D - 3 87 - -
Gma03g01403 373 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
Gma03g01403 373 SUPERFAMILY F-box domain 5 79 IPR036047 GO:0005515
Gma03g01403 373 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01403 Gma-Chr3 40156394 40159658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01403 - - gmx:100500689 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01403 03 40156394 40159658 Gma03g01403 03 40156394 40159658 ECH
Gma19g01466 19 43881792 43888307 Gma03g01403 03 40156394 40159658 GST
Gma03g01403 03 40156394 40159658 Gma10g01501 10 42124108 42127600 PCT
Gma03g01403 03 40156394 40159658 Gma20g02203 20 49142156 49145692 PCT