Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01423 ATGGCCAAGGAAGCTTCTCTGTGCCTCTTGTTTCTCTTCTCCTTTCTCAGTACCTCCTGTTCTGGATCTCTGGTGGGTTTTTCCTACCGTGAGAGAGGAGACACTTCAACATCTGCTAGAACCATATCATTCCTCCAGCAAAGCAACGTTTCGCCAACTCAGATTCGAATTTTTGTCACAGATCATAGGATTTTGAGCACTCTCAGCAACTCCAAAGTGCTAACTGATGTCTACTTGAACAAAAGTCAAGTTGAAAATTTCATTATTTCAAAACCCTCTGAACTAAAAGCTCATCTACTTAACATTCTCTCACATTCAAACATCAAGAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAATGAAATGCCTTTGTTCTTACATGCTTTGAAATCAATTGGTTCAGTTCTCAGAGAGCTTCACTTAGGAAGGGAGGTAAAAATCTCAGTAGCATATCCACTTTCATTCTTAGAAAAGTTGAATGCATCGCATGAAAACAGTATTCGTAGGATTCTTTCATTTATAAAGGAAACGAAATCCTTTGTCATGGTAGAAGACAGCATTGGTGGAGAATTAAGCATGGGGGATCACTTTGTTCATGCTATCATCAAACGAGCCACTCTTGCTGCTTCCATTCTTCCTTGCAAGGATGTTCCCATTGTTCTGACAATAAAAAGCACAGTTATCCTCCCTTCAATGGAATTAGCTCAATTCAGTGAGAAGATATCCAAATATCTAGAATCCGAAACTCATATTAGAAAAAGAATAGCTGCATTATATATAGAGGTGCATTCAGCAAAAGATTTTGCTAGCAAAAAACTCAAAAGGAGAAGTCTAGATGATACAACCAACCCAACAAACACAGTTTTCCCCACAAATCCAGCATCATCCACACCAATCATTACACCACCAGATACACCAACAATCATAACAGTTCCTGCCACAAATCCTGTCACAATTTCCCCTTCCAATCCTGCTGCAATGCCTGTGACAGTTCCTTCTACCACACCAGTGCCTAATCCTATAACCCCCACAAATCCAGCCAATTCACCAGTACCTGTGAGCAATCCAGCTACGACTCCTATAGCGACACCACCGCCAGTAACCAACCCTGTGACATCTTATCCACCTCCATCAGGAAATGTTCCTCCCGTCGTAAACCCGCAACCACAACCACCTCCTGCAAACACTAATGCTCCTGCCATTCAGGGGCAGAGTTGGTGTGTTGCAAAGCAGGGAGCTCCTGAAGCTTCTCTTCAATCAGCACTTGACTATGCTTGTGGAATGGGTGGTGCTGATTGTTCTCAAATCCAGCAGGGTGGGAATTGCTACAGTCCAGTTACTTTGCAGAACCATGCTTCTGTTGCCTTCAACAGCTACTACCAGAAGAATCCAGCTCCAACAAGCTGTGACTTTGGAGGGACTGCTACTTTAGTTAACACAAATCCAAGCACGGGTTCATGCATTTTCCCATCATCTTCATCGTCATCATCAACAACAACAATGCCAAAGTCATCACCCCCGACACCACCTACACAATCAAGTCCAATAGCACTACCACCACCAAGTCCATTAACACCTGAACCATCAATTCCAACAGCACCACCAACATCTTCATCTTCAGGAACAGGCCCTTTCGGGTATGGTGCCCCACCTTCAGAGTTAAATTCAAGCAATCCAGCGTCAGGTATAATGCCAGGTTTTGCTTCTGATAGCCCTCCTGTTGTAAATACCACTTCGGTGTCGCGTTCTGTGGGTTTGAGACCTTTTGTTGGCTTCACTATTCTGATGGTATCATTTGGCACTACGAGACTCAGTATGCACCCATAG 1836 0.4363 MAKEASLCLLFLFSFLSTSCSGSLVGFSYRERGDTSTSARTISFLQQSNVSPTQIRIFVTDHRILSTLSNSKVLTDVYLNKSQVENFIISKPSELKAHLLNILSHSNIKSIIASCGSECLAQNEMPLFLHALKSIGSVLRELHLGREVKISVAYPLSFLEKLNASHENSIRRILSFIKETKSFVMVEDSIGGELSMGDHFVHAIIKRATLAASILPCKDVPIVLTIKSTVILPSMELAQFSEKISKYLESETHIRKRIAALYIEVHSAKDFASKKLKRRSLDDTTNPTNTVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAAMPVTVPSTTPVPNPITPTNPANSPVPVSNPATTPIATPPPVTNPVTSYPPPSGNVPPVVNPQPQPPPANTNAPAIQGQSWCVAKQGAPEASLQSALDYACGMGGADCSQIQQGGNCYSPVTLQNHASVAFNSYYQKNPAPTSCDFGGTATLVNTNPSTGSCIFPSSSSSSSTTTMPKSSPPTPPTQSSPIALPPPSPLTPEPSIPTAPPTSSSSGTGPFGYGAPPSELNSSNPASGIMPGFASDSPPVVNTTSVSRSVGLRPFVGFTILMVSFGTTRLSMHP 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01423 611 MobiDBLite consensus disorder prediction 491 505 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 537 567 - -
Gma10g01423 611 SMART X8_cls 408 492 IPR012946 -
Gma10g01423 611 MobiDBLite consensus disorder prediction 283 298 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 280 303 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 342 402 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 491 582 - -
Gma10g01423 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gma10g01423 611 Pfam X8 domain 409 479 IPR012946 -
Gma10g01423 611 PRINTS Proline rich extensin signature 284 296 - -
Gma10g01423 611 PRINTS Proline rich extensin signature 315 336 - -
Gma10g01423 611 PRINTS Proline rich extensin signature 339 355 - -
Gma10g01423 611 PRINTS Proline rich extensin signature 356 373 - -
Gma10g01423 611 PRINTS Proline rich extensin signature 374 399 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 360 399 - -
Gma10g01423 611 MobiDBLite consensus disorder prediction 506 536 - -
Gma10g01423 611 Gene3D Glycosidases 25 188 - -
Gma10g01423 611 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 141 576 IPR044965 GO:0004553|GO:0005975
Gma10g01423 611 Gene3D - 403 507 - -
Gma10g01423 611 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 141 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01423 Gma-Chr10 41288898 41292220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01423 369 495 Glycoside Hydrolase AT2G05790 47.287 5.52e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01423 - - gmx:100794910 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01423 10 41288898 41292220 Gma10g01423 10 41288898 41292220 ECH
Gma10g01423 10 41288898 41292220 Gma20g00916 20 35696128 35698683 GST
Gma03g02107 03 46613109 46616128 Gma10g01423 10 41288898 41292220 PCT
Gma10g01423 10 41288898 41292220 Gma03g02107 03 46613109 46616128 PCT