Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02107 ATGGCCAAGGAACCTTCTCTATGCCTCTTGTTCCTCTCTTTTCTCATTTTCTGCTCTTCAGGGACTTCTGTATCTTCTTCTTCATCGTCCGTTGGTACAACATTCTTCCAAAAAAGCAAGATCTCCAAATCTGAGATTCGATTTTCTGTATCAGATTGCAAGATTTTGAGCACTCTGACCAACACCAACCTGTCAGTTGATTTCTTCTTAAACGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCAAAATCATCTCTAGTTTCATGGCTAGAAACTCATCTCATGAACATTATTCCCCAAGTTGACATCAGAAGCATCGTTGTTAGATGTGGCAGTGAGTGCTTAGGCCAATATGAGATGCCTTCACTCATACCTATTCTCAAATCAATTCATTCATTTCTCAGCAATCTTCAACTGAGAAGGGAAATAAAAGTCTCCGTGGCCTTTCCTCTTTCATTCTTAGAGAATTTGAATGCATTGTATGGAAATGATCTCCTTAGGATTGTTATGTTTTTGAAGAAAATAGATTCATTTATCATGATAGAAGACATCATTGGTGGAGAATTGAGTACTGTTCAGTCTGTTATCGAAAGAGCCACCCTTGCTGCTTCTATTCTTCCCTGCAAAGATGTTCCTGTGGTTCTCACAATCAAGAGCCATGATATTCCCAATTCAATGGAATTATCTCAATTCAGTGAGGCAGTATCCAAGTATCTTGAAGCGATATCTCATTTTACAAACAGAATAGTTGCATTGATTGCACAAGTATACACACTCAATGATTTTTTACTGCTCAAAAGAGAAGAGGGAGAAGAGATATGTCCTTTGTCCCTAAGAGAAAATCCAAGCAAAGTCCACATCAGAAGAACTCTACAAGACACAACCAACACACCTACCACAGTTTTCCCCACAAATCCAACCCCACCTTCACCTGTAATCACACCTCCAGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTCACGGTTTCCCCCACCAATCCAGCTTCAACACCTGTCACAGTTCCTTCTACCACACCAGTTGTTCCCTTACCCCCTACAAATCCAGCCAATCCAGTTACCAATCCTGTGGCCTCTTATCCACCACCATCATCAGGAAGTGTTCCTGTCACAAGTGCACTGCCTCCTCCTCCAAGCACAAATGCTCAAGCCATGCCAGCGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAGTTCCACAAGCTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGTCAGGTGTGGATTGTTCACAGATACAGCAAGGTGCGAGTTGTTACAATCCAAATTCATTACAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAAAAGAATCCTGCGCCTACAAGCTGTGACTTTGGAGGCACTGCCAACATAGTGAACACCAATCCGAGCTCGGGTTCTTGCATCTACCCATCATCTTCAGGGGCAGGCGCATCCGGCTCTGGTACTGGTAGCCCAGTTTTAGGGTCCCAAAGCCCTCCTGATTTAAATACCTCGTATTCAGCTGGTCTGAGACCTCTTATTGGCTGCATGGTTCTGGCAATATCATTAGTCACTGTAAGACTCACTACATGA 1617 0.4304 MAKEPSLCLLFLSFLIFCSSGTSVSSSSSSVGTTFFQKSKISKSEIRFSVSDCKILSTLTNTNLSVDFFLNESLVENFVSSKSKSSLVSWLETHLMNIIPQVDIRSIVVRCGSECLGQYEMPSLIPILKSIHSFLSNLQLRREIKVSVAFPLSFLENLNALYGNDLLRIVMFLKKIDSFIMIEDIIGGELSTVQSVIERATLAASILPCKDVPVVLTIKSHDIPNSMELSQFSEAVSKYLEAISHFTNRIVALIAQVYTLNDFLLLKREEGEEICPLSLRENPSKVHIRRTLQDTTNTPTTVFPTNPTPPSPVITPPDTPTIITVPSTNPVTVSPTNPASTPVTVPSTTPVVPLPPTNPANPVTNPVASYPPPSSGSVPVTSALPPPPSTNAQAMPAGQSWCVAKTGVPQASLQSALDYACGMSGVDCSQIQQGASCYNPNSLQNHASFAFNSYYQKNPAPTSCDFGGTANIVNTNPSSGSCIYPSSSGAGASGSGTGSPVLGSQSPPDLNTSYSAGLRPLIGCMVLAISLVTVRLTT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02107 538 Gene3D - 393 489 - -
Gma03g02107 538 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 133 498 - -
Gma03g02107 538 Pfam X8 domain 401 470 IPR012946 -
Gma03g02107 538 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 133 498 IPR044965 GO:0004553|GO:0005975
Gma03g02107 538 Gene3D Glycosidases 19 183 - -
Gma03g02107 538 MobiDBLite consensus disorder prediction 327 353 - -
Gma03g02107 538 MobiDBLite consensus disorder prediction 327 347 - -
Gma03g02107 538 SMART X8_cls 400 484 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02107 Gma-Chr3 46613109 46616128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02107 44 487 Glycoside Hydrolase AT2G05790 26.915 1.07e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02107 - - gmx:100809473 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02107 03 46613109 46616128 Gma03g02107 03 46613109 46616128 ECH
Gma03g02107 03 46613109 46616128 Gma10g01423 10 41288898 41292220 PCT
Gma03g02107 03 46613109 46616128 Gma20g00916 20 35696128 35698683 PCT
Gma10g01423 10 41288898 41292220 Gma03g02107 03 46613109 46616128 PCT
Gma20g00916 20 35696128 35698683 Gma03g02107 03 46613109 46616128 PCT