Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01416 ATGATGGGGCACAAGTATTTGTGGTTGGTCTTTTGCTTGTGGGCTTTAACATGCTCACTTCTTCCTTCTTTCTCCTTTGGACTAATGAGAATTGGTTTGAAGAAGAGAGATCTAGATCTTGATAGTATCAGAGCAGCTAGAATGGTAAGAGAAAAGCCAAGATTAGGCAGACCTGTGTTGGGTGCGTATGATCATGATCTTGGCAAACCAATTGACGAGGGCATAGTACCTTTGAAAAATTATTTGGATGCACAATATTATGGAGAGATTGGAATTGGCACACCCCCACAGAAATTTAATGTCATATTTGATACCGGTAGTTCCAACCTCTGGGTTCCATCATCAAAGTGCTATTTTTCTATTGCGTGCTATACCCATCATTGGTACAAGTCAAAGAAATCCAAAACATATACCAAAAATGGAACATCATGTAAAATAGGATATGGATCTGGATCAATATCTGGTTTTTTCAGTAAAGATCATGTTAAAGTTGGTGATGTTGTTGTCAAGAATCAGGATTTCATCGAGGCTACCCGAGAAGGAAGTCTTTCCTTTGTGTTAGCTAAGTTTGATGGATTACTTGGGCTTGGGTTTCAGGAGATCTCAGTTGAAAATGCTGTGCCAGTATGGTACAATATGGTGAAGCAAAATCTTGTAAGCGAACAGGTGTTCTCTTTTTGGCTCAATGGTGATCCAAAAGCGAAAGATGGTGGTGAACTAATTTTTGGAGGTATTGATCCTAAACACTTCAAAGGAGATCATATTTATGTCCCAGTTACTAAAAAGGGCTACTGGCAGATTGAAATGGGAGATTTTTTTATTGGAGGTCTCTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTACTGTTGTAACTGAAATCAATCATGCTATTGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGAAGTTGTTTCTGAATATGGAGAATTGTTATGGGATCTCTTGGTATCAGGGGTACGACCTGATGATGTATGCTCACAGGTTGGTTTATGTTTCAAAAGGGCTAAATCAGAGAGCAATGGAATTGAGATGGTGACCGAAAAGGGACAAAGAGAGTTATCAGCTAAAGATACTGCTTTGTGCACTTCCTGTCAGATGCTTGTGGTTTGGATTCAGAATCAACTAAAACAAAAGAAGACCAAGGAGATAGTATTCAACTATGTAAATCAGCTGTGCGAGAGCTTGCCAAGTCCAAATGGAGAGTCAGTAGTAGACTGTAATAGCATTTATGGATTGCCAAACATCACGTTTACTGTTGGAGACAAACCTTTCACCCTCACCCCTGAGCAGTATATTCTGAAAACTGGAGAAGGCATTGCAGAAGTTTGCCTTAGTGGGTTTATTGCTTTTGACATTCCTCCTCCTCGAGGTCCTCTCTGGATTCTTGGCGATGTTTTCATGAGGGTATATCACACCGTCTTTGACTATGGGAACCTCCGAGTTGGTTTCGCCAAAGCTGCCTAA 1527 0.4073 MMGHKYLWLVFCLWALTCSLLPSFSFGLMRIGLKKRDLDLDSIRAARMVREKPRLGRPVLGAYDHDLGKPIDEGIVPLKNYLDAQYYGEIGIGTPPQKFNVIFDTGSSNLWVPSSKCYFSIACYTHHWYKSKKSKTYTKNGTSCKIGYGSGSISGFFSKDHVKVGDVVVKNQDFIEATREGSLSFVLAKFDGLLGLGFQEISVENAVPVWYNMVKQNLVSEQVFSFWLNGDPKAKDGGELIFGGIDPKHFKGDHIYVPVTKKGYWQIEMGDFFIGGLSTGVCEGGCAAIVDSGTSLLAGPTTVVTEINHAIGAEGVLSVECKEVVSEYGELLWDLLVSGVRPDDVCSQVGLCFKRAKSESNGIEMVTEKGQRELSAKDTALCTSCQMLVVWIQNQLKQKKTKEIVFNYVNQLCESLPSPNGESVVDCNSIYGLPNITFTVGDKPFTLTPEQYILKTGEGIAEVCLSGFIAFDIPPPRGPLWILGDVFMRVYHTVFDYGNLRVGFAKAA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01416 508 ProSiteProfiles Peptidase family A1 domain profile. 86 505 IPR033121 -
Gma10g01416 508 SUPERFAMILY Acid proteases 8 507 IPR021109 -
Gma10g01416 508 Gene3D - 316 417 - -
Gma10g01416 508 SMART sapb_4 280 352 IPR008139 -
Gma10g01416 508 Gene3D Acid Proteases 245 508 IPR021109 -
Gma10g01416 508 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Gma10g01416 508 PRINTS Pepsin (A1) aspartic protease family signature 238 251 IPR001461 GO:0004190|GO:0006508
Gma10g01416 508 PRINTS Pepsin (A1) aspartic protease family signature 288 299 IPR001461 GO:0004190|GO:0006508
Gma10g01416 508 PRINTS Pepsin (A1) aspartic protease family signature 481 496 IPR001461 GO:0004190|GO:0006508
Gma10g01416 508 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 288 299 IPR001969 GO:0004190|GO:0006508
Gma10g01416 508 SUPERFAMILY Saposin 317 417 IPR011001 -
Gma10g01416 508 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Gma10g01416 508 ProSiteProfiles Saposin B type domain profile. 378 419 IPR008139 -
Gma10g01416 508 ProSiteProfiles Saposin B type domain profile. 316 356 IPR008139 -
Gma10g01416 508 Pfam Saposin-like type B, region 1 381 417 IPR007856 GO:0006629
Gma10g01416 508 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 6 508 IPR001461 GO:0004190|GO:0006508
Gma10g01416 508 Pfam Saposin-like type B, region 2 320 352 IPR008138 -
Gma10g01416 508 Pfam Eukaryotic aspartyl protease 85 507 IPR033121 -
Gma10g01416 508 Gene3D Acid Proteases 29 244 IPR021109 -
Gma10g01416 508 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 6 508 - -
Gma10g01416 508 CDD phytepsin 76 506 IPR033869 GO:0004190
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01416 Gma-Chr10 41202681 41207768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01416 K08245 - gmx:100776327 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01416 10 41202681 41207768 Gma10g01416 10 41202681 41207768 ECH
Gma10g01416 10 41202681 41207768 Gma20g00909 20 35616189 35620980 GST
Gma19g02139 19 50283127 50287986 Gma10g01416 10 41202681 41207768 PCT
Gma03g02103 03 46575344 46581003 Gma10g01416 10 41202681 41207768 PCT
Gma10g01416 10 41202681 41207768 Gma19g02139 19 50283127 50287986 PCT
Gma10g01416 10 41202681 41207768 Gma03g02103 03 46575344 46581003 PCT