Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00726 ATGGATGGGATAATGAACAGCCCAAAAATATATGAAAATAATTCACACCCATTCCACACCCTCCAACTCGCCGTCTCCACATCCATCACAAGAGCCCACCACCTCAAAAACCACAACaaccctagttcactcaaaaccctagttcaccccaaaaccTACGGAGGCTACTCAATAGACCTCAAATTCGGAACCCCACCACAAACGTTCCCCTTCGTTCTCGACACTGGAAGCAGCCTCGTCTGGCTCCCATGCTACTCCCACTACCTCTGCTCCAAATGCAACTCTTTCTCAAACAACAACACACCAAAATTCATCCCAAAAGACTCATTTTCTTCAAAGTTTGTTGGCTGCAGAAACCCTAAATGCGCTTGGGTCTTTGGCTCCGACGTTACGTCTCATTGTTGCAAGCTAGCCAAAGCCGCTTTTAGTAATAACAATAACTGTTCCCAAACATGCCCTGCATACACCGTCCAATACGGTCTCGGCTCCACCGCGGGTTTTCTCTTATCAGAAAATCTCAATTTTCCCGCAAAAAATGTTTCTGATTTTCTCGTCGGCTGCTCCGTCGTCTCTGTCTACCAGCCTGGCGGAATCGCCGGGTTCGGCCGGGGAGAAGAGTCCTTACCGGCGCAGATGAACCTCACGAGATTCTCTTATTGCCTACTCTCTCACCAATTCGACGAATCGCCGGAAAACAGCGACCTCGTCATGGAAGCTACCAACTCCGGCGAGGGAAAAAAAACCAACGGCGTCAGCTACACGGCGTTTCTGAAAAATCCGTCAACAAAAAAGCCCGCGTTCGGCGCGTACTATTATATCACTCTTAGAAAAATTGTTGTTGGTGAAAAGCGCGTGAGGGTTCCGAGGAGGATGTTGGAGCCCGACGTTAACGGCGACGGCGGGTTCATCGTTGACTCGGGGTCAACGTTAACATTCATGGAGAGGCCGATTTTCGATCTGGTAGCGGAGGAGTTTGTAAAGCAGGTGAACTACACGCGCGCGAGGGAGCTTGAAAAACAGTTTGGGCTGAGTCCGTGTTTTGTTTTGGCGGGTGGCGCTGAAACGGCGTCGTTTCCCGAGATGAGGTTTGAGTTCAGGGGTGGCGCGAAGATGAGGCTGCCGGTGGCGAATTATTTCTCGCTGGTGGGGAAAGGTGACGTGGCGTGCTTGACGATTGTTTCTGATGACGTGGCGGGTCAGGGTGGGGCGGTGGGGCCCGCAGTGATATTGGGGAACTATCAGCAACAGAATTTCTACGTGGAGTGTGACTTGGAGAATGAAAGGTTTGGGTTTCGGAGTCAGAGTTGCCAAAAGAGGGTTTATTAA 1326 0.4925 MDGIMNSPKIYENNSHPFHTLQLAVSTSITRAHHLKNHNNPSSLKTLVHPKTYGGYSIDLKFGTPPQTFPFVLDTGSSLVWLPCYSHYLCSKCNSFSNNNTPKFIPKDSFSSKFVGCRNPKCAWVFGSDVTSHCCKLAKAAFSNNNNCSQTCPAYTVQYGLGSTAGFLLSENLNFPAKNVSDFLVGCSVVSVYQPGGIAGFGRGEESLPAQMNLTRFSYCLLSHQFDESPENSDLVMEATNSGEGKKTNGVSYTAFLKNPSTKKPAFGAYYYITLRKIVVGEKRVRVPRRMLEPDVNGDGGFIVDSGSTLTFMERPIFDLVAEEFVKQVNYTRARELEKQFGLSPCFVLAGGAETASFPEMRFEFRGGAKMRLPVANYFSLVGKGDVACLTIVSDDVAGQGGAVGPAVILGNYQQQNFYVECDLENERFGFRSQSCQKRVY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00726 441 SUPERFAMILY Acid proteases 53 436 IPR021109 -
Gma10g00726 441 Pfam Xylanase inhibitor C-terminal 271 432 IPR032799 -
Gma10g00726 441 CDD pepsin_A_like_plant 55 436 IPR034161 -
Gma10g00726 441 PANTHER BNACNNG47670D PROTEIN 11 436 - -
Gma10g00726 441 Gene3D Acid Proteases 240 440 IPR021109 -
Gma10g00726 441 PRINTS Pepsin (A1) aspartic protease family signature 302 313 IPR001461 GO:0004190|GO:0006508
Gma10g00726 441 PRINTS Pepsin (A1) aspartic protease family signature 62 82 IPR001461 GO:0004190|GO:0006508
Gma10g00726 441 Pfam Xylanase inhibitor N-terminal 56 225 IPR032861 -
Gma10g00726 441 PANTHER OS07G0603500 PROTEIN-RELATED 11 436 - -
Gma10g00726 441 Gene3D Acid Proteases 32 234 IPR021109 -
Gma10g00726 441 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 71 82 IPR001969 GO:0004190|GO:0006508
Gma10g00726 441 ProSiteProfiles Peptidase family A1 domain profile. 56 432 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00726 Gma-Chr10 8915989 8917683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00726 54 223 Miscellaneous Gene Families AT1G44130 30.688 3.76e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00726 - - gmx:100810876 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00726 10 8915989 8917683 Gma10g00726 10 8915989 8917683 ECH
Gma10g00726 10 8915989 8917683 Gma02g01878 02 43597555 43599346 GST
Gma19g01887 19 48075765 48077370 Gma10g00726 10 8915989 8917683 PCT
Gma03g01846 03 44457915 44458495 Gma10g00726 10 8915989 8917683 PCT
Gma10g00726 10 8915989 8917683 Gma19g01887 19 48075765 48077370 PCT
Gma10g00726 10 8915989 8917683 Gma03g01846 03 44457915 44458495 PCT