Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00581 ATGCGGTGTTGCATTCCGACGTTGTTGGCCGTAATCACCGTACTGTTGTCGGCGGTGCACGGCGTTTTCCTTCCTCTGGAGCGGAGCATTCCTCCGACGAGCCACCGCGTGGAGGTGGCGGCGCTGAGGGCCCGCGATAGAGCCCGCCATGCCCGCATGTTGCGCGGCGTCGTCGACTTCTCCGTCCAAGGCACCTCCGATCCAAACTCCGTTGGGTTGTATTATACGAAAGTGAAGATGGGAACTCCTCCTAAAGAGTTTAACGTTCAGATTGATACGGGGAGTGATATATTGTGGGTGAATTGCAATACTTGCAGTAATTGTCCTCAGTCTAGTCAACTAGGGATTGAGCTTAATTTCTTTGACACGGTTGGCTCATCCACGGCAGCGTTGATTCCCTGCTCGGACCTGATATGCACTTCTGGAGTCCAGGGTGCTGCTGCTGAGTGCTCCCCGAGGGTTAATCAGTGCAGCTACACCTTTCAGTATGGAGATGGGAGTGGGACATCGGGTTATTATGTTTCGGATGCAATGTATTTTAACTTGATCATGGGACAGCCTCCGGCAGTTAACTCTACGGCTACCATTGTTTTTGGGTGTAGCATTAGTCAGTCTGGAGATTTGACTAAGACAGATAAGGCAGTTGATGGAATTTTTGGGTTTGGCCCTGGACCTCTATCTGTTGTATCACAATTGTCATCTCAAGGAATAACACCCAAAGTTTTCTCTCATTGCTTAAAGGGAGACGGCAATGGAGGAGGCATTCTAGTTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTATAGTCCACTTGTCCCATCACAGCCTCATTACAACTTGAATCTTCAGAGTATTGCTGTCAATGGGCAACCTCTCCCAATTAATCCAGCTGTATTTTCAATATCTAACAACCGAGGAGGGACTATAGTTGACTGTGGTACAACATTGGCATATCTTATTCAAGAAGCTTATGATCCTCTTGTCACTGCTATAAATACTGCCGTGTCACAATCTGCTAGGCAAACAAATTCCAAAGGAAACCAGTGTTATCTGGTCTCAACCAGTATAGGTGACATTTTTCCTTTGGTAAGTTTAAACTTTGAGGGTGGAGCATCAATGGTTTTAAAACCAGAGCAGTACCTTATGCATAATGGTTACCTTGATGGTGCAGAAATGTGGTGCGTTGGTTTCCAGAAATTGCAGGAGGGAGCCTCAATTTTAGGAGATCTTGTCCTAAAGGATAAGATAGTTGTGTATGACATAGCTCAACAACGAATTGGATGGGCTAACTATGACTGTTCTTTGTCTGTAAATGTTTCGGTGACTATGAGCAAGGACGAGTACATCAATGCAGGGCAGCTTCATGTTAGCAGCTCCAAAATACACATTCTTTCTAAGTTACTACCTGAGGATGATATGCAGTTCAGGATCAAATTAACAACGTCAAAAGGCATGGATAGCTCTTATCTATCCAAGGCTCATCTTCCATTGCAATTCACATAA 1503 0.4544 MRCCIPTLLAVITVLLSAVHGVFLPLERSIPPTSHRVEVAALRARDRARHARMLRGVVDFSVQGTSDPNSVGLYYTKVKMGTPPKEFNVQIDTGSDILWVNCNTCSNCPQSSQLGIELNFFDTVGSSTAALIPCSDLICTSGVQGAAAECSPRVNQCSYTFQYGDGSGTSGYYVSDAMYFNLIMGQPPAVNSTATIVFGCSISQSGDLTKTDKAVDGIFGFGPGPLSVVSQLSSQGITPKVFSHCLKGDGNGGGILVLGEILEPSIVYSPLVPSQPHYNLNLQSIAVNGQPLPINPAVFSISNNRGGTIVDCGTTLAYLIQEAYDPLVTAINTAVSQSARQTNSKGNQCYLVSTSIGDIFPLVSLNFEGGASMVLKPEQYLMHNGYLDGAEMWCVGFQKLQEGASILGDLVLKDKIVVYDIAQQRIGWANYDCSLSVNVSVTMSKDEYINAGQLHVSSSKIHILSKLLPEDDMQFRIKLTTSKGMDSSYLSKAHLPLQFT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00581 500 Gene3D Acid Proteases 57 260 IPR021109 -
Gma10g00581 500 CDD pepsin_A_like_plant 74 433 IPR034161 -
Gma10g00581 500 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 452 - -
Gma10g00581 500 SUPERFAMILY Acid proteases 71 436 IPR021109 -
Gma10g00581 500 Pfam Xylanase inhibitor C-terminal 277 429 IPR032799 -
Gma10g00581 500 Pfam Xylanase inhibitor N-terminal 74 259 IPR032861 -
Gma10g00581 500 Gene3D Acid Proteases 261 440 IPR021109 -
Gma10g00581 500 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Gma10g00581 500 PRINTS Pepsin (A1) aspartic protease family signature 308 319 IPR001461 GO:0004190|GO:0006508
Gma10g00581 500 PRINTS Pepsin (A1) aspartic protease family signature 405 420 IPR001461 GO:0004190|GO:0006508
Gma10g00581 500 PANTHER ASPARTYL PROTEASES 7 452 IPR001461 GO:0004190|GO:0006508
Gma10g00581 500 ProSiteProfiles Peptidase family A1 domain profile. 74 429 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00581 Gma-Chr10 6093698 6100146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00581 58 434 Miscellaneous Gene Families AT1G44130 28.856 1.12e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00581 - - gmx:100798300 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00581 10 6093698 6100146 Gma10g00581 10 6093698 6100146 ECH
Gma10g00581 10 6093698 6100146 Gma13g01274 13 27097357 27105195 GST
Gma03g01731 03 43422233 43428090 Gma10g00581 10 6093698 6100146 PCT
Gma10g00581 10 6093698 6100146 Gma03g01731 03 43422233 43428090 PCT