Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00234 ATGGGTAAGATTCTGAGAGAAACCGCGAGGCCGTTCTCGAATTGTTCGTCGTCGTCGGCGTCTCCGTTGTCGGCGCCGCCGGCAACGACGTCGTCGACGTCGTTGACGGACACGGTGAGGGGGTCGCACCGGTTCAAGATCACGGGGTATTCGCTGTCGAAGGGGATTGGGATTGGGAAGTACATAGCTTCTGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTTTACCCCGACGGGAAGAGCGTGGAGGACAATGCTACGTACGTTTCGCTCTTCATCGCGCTTGCTAGCGAAGGGACCGACGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGACACAAGGTGCATAGCCATTTTGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACAGAGGGCCCTAAAATATATAAAATCCCAATTCCGTCTTCTAACATGGGTCAGCAATTTGGGAAGCTACTAGAAAGTGGGAAAGACAGTGATGTCAGTTTTGAAGTGAATGGAGAAATTTTCGCTGCTCATAAATTGGTTCTAGCAGCTCGCTCACCTGTTTTCAGGGCTCAACTTTTCGGTCCGATGAAAAATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTCTTTAAGgcattgcttcatgttatatattgggactcactacctgacatgcaagagcttactgggttgagctcaaaatgggctactaccttgatggctcagcatctgctagcagcagctgatcggtatggcttagagagacttaggctcatgtgtgaaacaagtctctgtgaagatgttgcaataaacaccgttgctacgactctagccttggcagaacagcaccattgtttccaactgaaaGCAGTCTGTCTGAAATTTGTTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCTTGTGCAAGCATAGGAATGAATTGATACTTGATGGCAGCGACGTAAATGGAAGGCGGGTGAAGCAAAGGCTATAG 1242 0.3849 MGKILRETARPFSNCSSSSASPLSAPPATTSSTSLTDTVRGSHRFKITGYSLSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPSSNMGQQFGKLLESGKDSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKNQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLSSKWATTLMAQHLLAAADRYGLERLRLMCETSLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNELILDGSDVNGRRVKQRL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00234 413 ProSiteProfiles BTB domain profile. 210 269 IPR000210 GO:0005515
Gma10g00234 413 SMART math_3 45 157 IPR002083 GO:0005515
Gma10g00234 413 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 22 392 - -
Gma10g00234 413 CDD MATH 41 174 IPR002083 GO:0005515
Gma10g00234 413 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 39 179 IPR008974 GO:0005515
Gma10g00234 413 Gene3D Potassium Channel Kv1.1; Chain A 186 314 IPR011333 -
Gma10g00234 413 ProSiteProfiles MATH/TRAF domain profile. 40 174 IPR002083 GO:0005515
Gma10g00234 413 SUPERFAMILY TRAF domain-like 37 176 - -
Gma10g00234 413 CDD BTB_POZ_BPM_plant 196 316 - -
Gma10g00234 413 MobiDBLite consensus disorder prediction 10 36 - -
Gma10g00234 413 CDD BACK_AtBPM-like 316 379 IPR034090 -
Gma10g00234 413 SMART BTB_4 210 319 IPR000210 GO:0005515
Gma10g00234 413 Gene3D - 319 395 - -
Gma10g00234 413 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 22 392 IPR045005 GO:0016567
Gma10g00234 413 MobiDBLite consensus disorder prediction 1 36 - -
Gma10g00234 413 SUPERFAMILY POZ domain 187 317 IPR011333 -
Gma10g00234 413 Pfam BTB/POZ domain 201 317 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00234 Gma-Chr10 2172253 2176660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00234 K10523 - gmx:100811065 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00234 10 2172253 2176660 Gma10g00234 10 2172253 2176660 ECH
Gma10g00234 10 2172253 2176660 Gma02g01362 02 15751266 15762361 GST
Gma19g01454 19 43741745 43746579 Gma10g00234 10 2172253 2176660 PCT
Gma03g01390 03 40009545 40013723 Gma10g00234 10 2172253 2176660 PCT
Gma10g00234 10 2172253 2176660 Gma19g01454 19 43741745 43746579 PCT
Gma10g00234 10 2172253 2176660 Gma03g01390 03 40009545 40013723 PCT