Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01362 ATGGGTAAGATTCGGAGAGAATCCGCGAGGCCGTTCTCGAATTGTTCGTCGTCGGCGTCTCCGTCATCGGCGCCGCCGGCAACGACGTCGTCGATGTCGTTGACGGACACGGTGAGGGGGTCGCACCGGTTCAAGATCACGGGGTATTCGCTGTCGAAGGGGATTGGGATTGGGAAGTACATAGCGTCGGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTTTACCCCGATGGGAAGAGCGTTGAGGACAATGCAACGTACGTTTCGCTCTTCATCGCGCTCGCTAGCGAAGGGACCGATGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGGCACAAGGTGCATAGCCATTTTGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACAGAAGGCCCTAAAATATATAAAATCCCAATTCCGCCTTCCAACATGGGTCAGCAATTTGGGAAACTACTAGAAAGTGGGAAAGGCAGTGATGTCAGTTTTGAAGTGAATGGAGAAATTTTCGCTGCTCATAAATTGGTTCTAGCAGCTCGTTCACCTGTTTTCAGGGCCCAACTTTTCGGTCCAATGAAAGATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTCAAGgcattgcttcatgttatatattgggactcactacctgacatgcaagagcttactgggttgagctcaaaatgggctactaccttgatggctcagcatctgctagcagcagctgatcggtatggcttggagagacttaggcttatgtgtgaagcaagtctctgtgatgatgttgcaataaacacggtcgctacgactctagctttggcagaacagcaccattgtttccaactgaaaGCAGTCTGTCTAAAATTTGTTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCGTCTGTTTTGACTGAACTTTTGGACAAAGACTATAGTGCGAACACTGACAAGTTTCTCTGTCTGTCTGTGATAACTTTGCTCGAACTTCTACCGGAAACTGGGGATTTTTCTCCAGCAATGGCAAGTCCGTCCTCGCTGAACAGCCTCTCACGGTGGTTGGCGCCACCATTAGCACTGACGGCGCACGCGTTCTCGCAGCACCGGCGGCATACGCATTCTCACCGCACCGACGACTCCACCAACCACCACCGCTCAAGATACAAATCCGGATTCAACGCACAATCTCTCACCAATTTCAGGGAAAACAACGCATATCTAAAAACAAAAACTCAGATCCGTGAATTACTTCGTTATTATCGAAGCAACGCCAATCTGTTGCCATCGGTATCAACACGCAAGGTGTCGCTCTCGAAGCCGGAAACACAGTCGAAAACCCTCTTCCTCCTCTGCATTGATTTGTATCGGCCACCACCCACTTTGATGCAAAGTATTGATTTCCAGAGCATATGTGGAGTGGTTTTTGTAATGTTTCAGATGAAGAATCCCAATTCTCTCTCATTGGGAATGAACCTTCTCTCTCTAACCTTGCCACTTCCCCTTTATTGTTCATCTCTTTCTGTAACGAGACTTTCTGCATTTCCCTCTTCGTACAAGTGCACATCTGGCGCAGTTTTAAGGAGATGTGTCAAAGAGGAAAAGGAAGAGGAGGAGCTTCTAGAAGGGATGCCAAAGGAGTACTATGACGATGAATGGCAAACCCAACAACGTGAGAAGACCAAGGAATTGCATCCGCTACGGAAACAGGAAGAAGAGGAAGAAGAAAGAAAGATTGAAGAGTATCGTGAAATTGGCATGCGGTTGAAGGAATACCCAGAAGAAGATGTCATAAAAGCAAGGAAATTGGTTTCAAGCTTTCTCAGAGCTGCTGAAGAAGTAGAAGAGAGAATTGAGGAAGCTGCCAAGAAAGGAGAATTCACTGAACTTGTTTTAATGGTCATATGGAATCGCCTTGATCTTGCTCGGCATGATGAAGAAAAGGATGCCATTAGAAGTCTGGATCTGTTGTACAGAAGGGTTGAGACTGAGATTTTGAAATGA 2205 0.4154 MGKIRRESARPFSNCSSSASPSSAPPATTSSMSLTDTVRGSHRFKITGYSLSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPPSNMGQQFGKLLESGKGSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKDQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLSSKWATTLMAQHLLAAADRYGLERLRLMCEASLCDDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLDKDYSANTDKFLCLSVITLLELLPETGDFSPAMASPSSLNSLSRWLAPPLALTAHAFSQHRRHTHSHRTDDSTNHHRSRYKSGFNAQSLTNFRENNAYLKTKTQIRELLRYYRSNANLLPSVSTRKVSLSKPETQSKTLFLLCIDLYRPPPTLMQSIDFQSICGVVFVMFQMKNPNSLSLGMNLLSLTLPLPLYCSSLSVTRLSAFPSSYKCTSGAVLRRCVKEEKEEEELLEGMPKEYYDDEWQTQQREKTKELHPLRKQEEEEEERKIEEYREIGMRLKEYPEEDVIKARKLVSSFLRAAEEVEERIEEAAKKGEFTELVLMVIWNRLDLARHDEEKDAIRSLDLLYRRVETEILK 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01362 734 ProSiteProfiles BTB domain profile. 209 268 IPR000210 GO:0005515
Gma02g01362 734 SMART math_3 44 156 IPR002083 GO:0005515
Gma02g01362 734 MobiDBLite consensus disorder prediction 1 35 - -
Gma02g01362 734 Pfam BTB/POZ domain 200 316 IPR000210 GO:0005515
Gma02g01362 734 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 21 386 IPR045005 GO:0016567
Gma02g01362 734 SUPERFAMILY POZ domain 186 316 IPR011333 -
Gma02g01362 734 SUPERFAMILY TRAF domain-like 36 175 - -
Gma02g01362 734 CDD BACK_AtBPM-like 315 378 IPR034090 -
Gma02g01362 734 SMART BTB_4 209 318 IPR000210 GO:0005515
Gma02g01362 734 Gene3D - 318 389 - -
Gma02g01362 734 MobiDBLite consensus disorder prediction 10 35 - -
Gma02g01362 734 ProSiteProfiles MATH/TRAF domain profile. 39 173 IPR002083 GO:0005515
Gma02g01362 734 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 21 386 - -
Gma02g01362 734 Coils Coil 671 691 - -
Gma02g01362 734 CDD BTB_POZ_BPM_plant 195 315 - -
Gma02g01362 734 CDD MATH 40 173 IPR002083 GO:0005515
Gma02g01362 734 Gene3D Potassium Channel Kv1.1; Chain A 185 312 IPR011333 -
Gma02g01362 734 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 38 178 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01362 Gma-Chr2 15751266 15762361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01362 K10523 - gmx:100799666 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01362 02 15751266 15762361 Gma02g01362 02 15751266 15762361 ECH
Gma10g00234 10 2172253 2176660 Gma02g01362 02 15751266 15762361 GST
Gma19g01454 19 43741745 43746579 Gma02g01362 02 15751266 15762361 PCT
Gma03g01390 03 40009545 40013723 Gma02g01362 02 15751266 15762361 PCT
Gma02g01362 02 15751266 15762361 Gma19g01454 19 43741745 43746579 PCT
Gma02g01362 02 15751266 15762361 Gma03g01390 03 40009545 40013723 PCT