Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00163 ATGACTTTCTCCTTTTCCTTCTTCACCATCACCACTCTGCTTTCTCTGTTCTCTCTAATTCTGCTTCATGCCAATGCCTTCCCAGTCCCCATGCATCGCCACCCTCGCTTTGCCACTCATAACTACAGAGATGCTCTCACTAAATCCATTCTCTTCTTTGAAGGCCAGAGGTCAGGGAAGCTCCCTCCTAACCAGAGAATGTCTTGGAGGAGAGACTCTGGCCTCTCTGATGGCTCAGCCATGCACGTTGATTTAGTTGGAGGGTACTATGATGCTGGGGACAATGTAAAATTTGGTTTTCCCATGGCCTTCACCACCACCATGCTTTCATGGAGCGTTATTGAGTTTGGTGGGCTAATGAAAGGTGAGTTGCAGAATGCCAGAGAGGCCATTCGCTGGGGCACTGATTATCTTCTCAAAGCCACTGCACATCCAAACACCATTTATGTTCAGGTGGGAGACGCTAAGAAGGACCATGCTTGTTGGGAGAGACCAGAGGACATGGACACACTAAGAAGCGTGTTTAAAATAGATGCAAACACACCTGGTTCAGAAGTTGCCGCGGAAACTGCTGCAGCTCTTGCAGCTGCTTCTCTTGTTTTTAGAAGAAGTGACCCCACATACTCCAAAGTTTTAGTGAGGAGAGCCATCAGGGTCTTCCAGTTTGCTGATAAGTACAGGGGATCCTACAGCAATGCCTTGAAACCTTATGTGTGCCCCTTCTATTGCTCTTACTCTGGTTATCAGGATGAGCTGTTGTGGGGTGCTGCCTGGCTGCACAAGGCTACCAGGAATCCAATGTACCTAAACTACATCAAAGTTAATGGCCAGATCCTTGGGGCTGCAGAGTTTGACAACACCTTTGGGTGGGATAACAAGCATGCTGGAGCAAGAATACTTCTTTCCAAGGAATTCCTGGTTCAAAGGGTACAATCCCTCCATGACTACAAGGGTCATGCGGACAATTTCGTCTGTTCTCTAATTCCTGGAACCTCTTTTTCTTCCACTCAATATACCCCAGGTGGGCTTCTTTTCAAGATGAGTGATAGCAACATGCAGTATGTCACATCCACCTCCTTCCTTCTGCTAACATATGCCAAATACTTGACCCAATCCCATATGCTTGTTAACTGTGGTGGAATCACAGTAACCCCAAGGAGACTCCGGACAATAGCTAAGAAACAGGTGGATTACTTGCTTGGAGACAACCCGTTGAAGATGTCGTACATGGTGGGGTATGGTCCACGGTACCCACGAAGGATACACCATAGGGGATCATCTCTACCGTCGATTGCTGTGCACCCGGGAAAGATCCAGTGTTCCGCAGGGTTCAGTGTGATGAATTCACAATCTCCCAACCCAAACATTCTAGTGGGGGCCATTGTTGGTGGACCGGATGAGCATGATAGGTTCCCAGATCAACGGTTGGAGCTGCTAATCACCACGGCTACGGGGAGGGCCCTTTTTCTCTTAGGCGTTGTTTTCCTCTCTTGCACCTTGATAGGTGCATCTTCGTGTGGCTTTGAGACTCGCCGTAGCCTCCTCCTTCCAGTTCCGAAAAACGGTCCTGCAATTTTTGATGTGACAAAATTTGGTGCTGTGGCAGATGACAAAACTGACAATATTGATGCATTTAGGGCTGCATGGGGAGAAGCATGCAGAAACAGTACTACTCAAGCAAAGGTTTTGATCCCAGCGGGAACATTTCGTGCTGCACAAACTATGTTCGCGGGGCCATGTACCAGCCCAAAGCCTATAACCATTGAAGTTATAGGAACTGTTAAAGCTAGCACAGATCCATCTTAG 1806 0.479 MTFSFSFFTITTLLSLFSLILLHANAFPVPMHRHPRFATHNYRDALTKSILFFEGQRSGKLPPNQRMSWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELQNAREAIRWGTDYLLKATAHPNTIYVQVGDAKKDHACWERPEDMDTLRSVFKIDANTPGSEVAAETAAALAAASLVFRRSDPTYSKVLVRRAIRVFQFADKYRGSYSNALKPYVCPFYCSYSGYQDELLWGAAWLHKATRNPMYLNYIKVNGQILGAAEFDNTFGWDNKHAGARILLSKEFLVQRVQSLHDYKGHADNFVCSLIPGTSFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTQSHMLVNCGGITVTPRRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSIAVHPGKIQCSAGFSVMNSQSPNPNILVGAIVGGPDEHDRFPDQRLELLITTATGRALFLLGVVFLSCTLIGASSCGFETRRSLLLPVPKNGPAIFDVTKFGAVADDKTDNIDAFRAAWGEACRNSTTQAKVLIPAGTFRAAQTMFAGPCTSPKPITIEVIGTVKASTDPS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00163 601 PANTHER ENDO-1,4-BETA-GLUCANASE 8 477 - -
Gma10g00163 601 SUPERFAMILY Six-hairpin glycosidases 39 475 IPR008928 GO:0005975
Gma10g00163 601 PANTHER ENDOGLUCANASE 17 8 477 - -
Gma10g00163 601 SUPERFAMILY Pectin lyase-like 515 601 IPR011050 -
Gma10g00163 601 Pfam Glycosyl hydrolase family 9 42 475 IPR001701 GO:0004553|GO:0005975
Gma10g00163 601 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 398 424 IPR018221 -
Gma10g00163 601 Gene3D - 518 601 IPR012334 -
Gma10g00163 601 Gene3D - 38 484 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00163 Gma-Chr10 1514101 1520891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00163 7 475 Glycoside Hydrolase AT1G02800 74.105 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00163 K01179 - gmx:100789144 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00163 10 1514101 1520891 Gma10g00163 10 1514101 1520891 ECH
Gma10g00163 10 1514101 1520891 Gma02g00158 02 1504080 1506606 GST
Gma03g01989 03 45543491 45545952 Gma10g00163 10 1514101 1520891 PCT
Gma10g00163 10 1514101 1520891 Gma03g01989 03 45543491 45545952 PCT