Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01191 ATGAAAACCCCTAACAAAGCCTCATTACTCTTATTCCCTCTCTTGTCCCTTTCCTTATTTATCAACCATTCCCATGCAGCAGGAATCGCTGTGTACTGGGGCCAAAACGGTGGAGAAGGCACCTTAGCAGAAGCTTGCAACACAGGAAACTACCAATATGTGAACATAGCCTTCTTGTCCACTTTTGGAAATGGCCAAACCCCACAACTCAACCTTGCTGGTCATTGTGACCCTAACAACAATGGTTGCACAGGGTTGAGCAGTGATATCAATACTTGCCAAGACCTTGGCATCAAAGTGTTGCTCTCTCTTGGAGGTGGTGCTGGAAGCTACTCCCTCAGCTCAGCTGATGATGCCACACAACTTGCAAACTACCTCTGGGAGAATTTCCTTGGAGGCCAAACTGGATCAGGGCCATTAGGTGATGTTATCTTGGATGGCATTGACTTTGACATTGAGTCTGGTGGGAGTGACCATTATGATGACCTAGCCAGGGCACTAAACAGCTTCAGCTCACAGAGTAAGGTGTACTTGTCCGCAGCCCCACAGTGCATAATCCCTGATGCACACTTGGATGCTGCCATCCAAACTGGGCTCTTTGACTATGTGTGGGTTCAGTTCTACAACAACCCTTCATGCCAATACTCCAGTGGAAACACCAACGATTTGATCAATTCATGGAACCAGTGGATCACAGTGCCAGCTTCTCTAGTCTTCATGGGGCTTCCTGCATCTGAAGCAGCTGCTCCAAGTGGTGGCTTTGTGCCTGCTGATGTGTTAACCTCTCAGATTCTTCCTGTGATTAAACAGTCTTCAAATTATGGTGGAGTCATGCTTTGGGACAGATTCAATGATGTCCAAAATGGTTATAGTAATGCTATTATTGGAAGTGTTAATTAA 900 0.4622 MKTPNKASLLLFPLLSLSLFINHSHAAGIAVYWGQNGGEGTLAEACNTGNYQYVNIAFLSTFGNGQTPQLNLAGHCDPNNNGCTGLSSDINTCQDLGIKVLLSLGGGAGSYSLSSADDATQLANYLWENFLGGQTGSGPLGDVILDGIDFDIESGGSDHYDDLARALNSFSSQSKVYLSAAPQCIIPDAHLDAAIQTGLFDYVWVQFYNNPSCQYSSGNTNDLINSWNQWITVPASLVFMGLPASEAAAPSGGFVPADVLTSQILPVIKQSSNYGGVMLWDRFNDVQNGYSNAIIGSVN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01191 299 PANTHER ACIDIC ENDOCHITINASE 14 298 - -
Gma09g01191 299 Gene3D Glycosidases 27 297 - -
Gma09g01191 299 PANTHER ENDOCHITINASE 14 298 - -
Gma09g01191 299 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Gma09g01191 299 CDD GH18_hevamine_XipI_class_III 27 296 IPR045321 -
Gma09g01191 299 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 299 IPR001223 GO:0005975
Gma09g01191 299 SUPERFAMILY (Trans)glycosidases 25 293 IPR017853 -
Gma09g01191 299 Pfam Glycosyl hydrolases family 18 29 285 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01191 Gma-Chr9 32561614 32563371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01191 9 298 Glycoside Hydrolase AT5G24090 58.219 9.46e-121 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01191 K01183 - gmx:547454 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01191 09 32561614 32563371 Gma09g01191 09 32561614 32563371 ECH
Gma16g01514 16 35012437 35013937 Gma09g01191 09 32561614 32563371 GST
Gma09g01191 09 32561614 32563371 Gma10g02170 10 49246658 49247977 PCT
Gma10g02170 10 49246658 49247977 Gma09g01191 09 32561614 32563371 PCT