Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00291 GCACAACTATTTGAATGACTTGTCTTCCCTGGACCCAGAATTATATCGTCATCTTATCTTTCTAAAGCGTGACATTTCGGAGTTGGAACTATATTTTGTTATAGTAAACAACGAATATGGAGAGCAAACAGAAGAGGAGCTGCTTCCAGGGGGAAAGAACCTTCGTGTCACTAATGAGAATGTCATTACTTTCATCCATCTTGTGGCCAATCACcgcttgaattttcagATACGTCAACAAAGTTCAAATTTCTTGAGAGGACTTCAGCAACTTATTCAGAAGGATTGGATTGATATGTGTAATGAGCATGAACTTCAGCTTCTGAGATCAGGTTCACTTGACAGCTTGGATGTTGATTTGCGGCAGCGTACAAACTATGCAGGAGGCTATCATAGTGAGCATTATGTTATTGAGATGTTCTGGGAAGTTCTCAAAGGCTTTTCTTTAGAAAGCAATAAGAAATTTTTGAAGTTTGTGACAGGTTGCTCTCGGGGACCATTGCTTGGATTCCAATATCTTGAACCTTTGTTTTTCATACAAAGGGCCGGTGGTAATGATCCGGAAGAAGCTCTTGACCGATTACCCACATCAGCTACGTGCATGAACTTACTAAAGCTATTGGAACTGAACTGA 634 0.3943 HNYLNDLSSLDPELYRHLIFLKRDISELELYFVIVNNEYGEQTEEELLPGGKNLRVTNENVITFIHLVANHRLNFQIRQQSSNFLRGLQQLIQKDWIDMCNEHELQLLRSGSLDSLDVDLRQRTNYAGGYHSEHYVIEMFWEVLKGFSLESNKKFLKFVTGCSRGPLLGFQYLEPLFFIQRAGGNDPEEALDRLPTSATCMNLLKLLELN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00291 210 Gene3D Hect, E3 ligase catalytic domain 3 76 - -
Gma09g00291 210 SUPERFAMILY Hect, E3 ligase catalytic domain 3 206 IPR035983 GO:0004842
Gma09g00291 210 Pfam HECT-domain (ubiquitin-transferase) 4 207 IPR000569 GO:0004842
Gma09g00291 210 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 2 206 IPR044611 GO:0000209|GO:0061630
Gma09g00291 210 ProSiteProfiles HECT domain profile. 1 210 IPR000569 GO:0004842
Gma09g00291 210 SMART hect_3 1 210 IPR000569 GO:0004842
Gma09g00291 210 Gene3D Hect, E3 ligase catalytic domain 116 210 - -
Gma09g00291 210 PANTHER BNAC01G43970D PROTEIN 2 206 - -
Gma09g00291 210 Gene3D Hect, E3 ligase catalytic domains 77 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00291 Gma-Chr9 2688073 2691442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00291 K10589 - gmx:100787467 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00291 09 2688073 2691442 Gma09g00291 09 2688073 2691442 ECH
Gma15g01272 15 11182112 11217543 Gma09g00291 09 2688073 2691442 GST
Gma17g00350 17 2820269 2838604 Gma09g00291 09 2688073 2691442 PCT
Gma09g00291 09 2688073 2691442 Gma17g00350 17 2820269 2838604 PCT