Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01902 ATGGGCGCTTCTCTGCCCTCCAAGGAGGCCAACCTCTTCAAGCTTATTGTCaaatcatatgaaaccaaacaatataaaaagggtctcaaagcagctgatgcaattttgaaaaaatttccagaccatggagaaactttatcgatgaagggtttgacattaaattgcatggaccgtaagtctgaagcatacgaacTTGTTCGGCAAGGATTAAAGaatgaccttaaaagtcatgtttgctggcatgtttatggtctcctttatcggtcagacagagaatacagggaggcgatcaagtgctatcgaaatgcactgagaattgatcccgacaatattgaaattcttcgtgacctatcactcctacagGCACAAATGCGAGATTTGTCAGGCTTTGTCGAGACAAGACAACAACTTTTGACTTTGAAGCCAAATCATCGCATGAACTGGATTGGATTTTCTGTAGCCCATCATTTGAACTCTAATGCATCCAAAGCAGTTGAAATTTTGGAAGCATATGAAGGGACTTTGGAAGAGGATCATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATACAAGatctcattgttagaggaatgcgggtttcttgagagagctctggaggagttgcacaaaaaagaatctaaaattgttgataaacttgtatacaaagaacaagaggtttcacttttagtaaagcttggtcacctagaagaaggcgaagctttgtaccaggcattactttccatgaatcctgataattatagATATTATGAAGGTCTCCAAAAGTGTGTTGGATTATATTTAGAAGATGGCCAGTACTCTCCTGATCAAATAGATCGGTTAGATTCATTGTACAAAACACTTGTACAACAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGGTGACAAATTTCGAGAAGCAGCAGACAATTATATTAGGCCTCTCCTAACCAAGGGAGTTCCATCTCTGTTCTCTGATCTATCATCTTTGTACAATCATCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCGTTCAATTAGGATGTCTGGCCAATATCCTGGAAGGATGGACAAAGAACCTCCTTCAACTCTCATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGGCGAGGCCAATATGAAGTTGCTCTTTCTAAAATTGATGAAGCTATAGAACATACACCTACAGTCATTGATCTATATTCTGTTAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCCGATCGCTATGTTAATAGTGAATGTGTAAAGCGCATGTTGCAGGCTGATCAGGTGGCTTTGGCTGAAAAAACTGCTGTATTGTTCACAAAAGATGGGGATCAACACAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCAGGTGAAAGCTATTTCCGTCAAGGTGATCTTGGACGGGCACTCAAGAAATTTTTAGCAGTGGAGAAGCATTATGCTGATATTACTGAGGACCAATTTGATTTTCATTCATACTGCTTACGGAAAATGACTTTGTGTACTTATGTGGAAATGCTTAAATTTCAAGACCAATTGCACTCACATGCATATTTTCATAAAGCAGCAGCTGGTGCTATCAGGTGCTATATTAAGTTGCATGATTCTCCCCCAAAGTCTACAGCAGAGGAAGATGATAATATGTCAAAGTTGCTTCCTTCTCAGAAGAAGAAAATGAGACAAAAGCAGAGAAAGGCAGAAGCAAGAGCCAAAAAGGAGGCAGAAGAGAAGAATGAAGAGTCAAGTGCCAGTGGGGTATCAAAGTCTGGGAAGCGGCACATAAAACCTGTTGACCCTGATCCAAACGGAGAGAAGTTGTTGCAGGTTGAAGATCCACTGTCAGAAGCTACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTGATTCATTGGAGACGCACTTGCTCTCTTTTGAATTATATACAAGGAAACAAAAGATTTTGCTTGCCTTGCAGGCTGTAAAGCAGTTACTGAGATTGGATGCTGAACACCCTGATTCTCATCGTTGTTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATGCTTCTGTGACTGACAGTGAGAAACTGATTTGGAGTGTCTTAGAGGCTGAGCGCCCAACTATTAGTCAGCTGCATGAGAAATCCCTGTTTGAGGCAAACAACTCATTCCTTGAAAAACATAAAGATTCTTTGATGCATAGAGCAGCTTTTGCAGAAATATTGCATATTTTGGATTCAAACAGAAAGTCTGAGGCTGTTAAGTTCATTGAAGAGTCAACAAATAACATTGTGCCCAGAAATGGAGCACTTGGACCAATCAGGGAATGGAATCTTAAAGACTGTATTGCAGTTCACAAGCTTCTTGGAACAGTTCTTGCTGATCAGGATGCTGCATTGAGATGGAAGGTGCGTTGTGCAGAGTACTTCCCATATTCTACATACTTTGAGGGATGCCACAGCTCTGCCTCTCCCAACTCGGCCTTCAATCAGTTACGTAAGAACTCTGAAAATGAGAGTCCTAACCATTCAGTGGGTGGTCAAAATGTGGGCTCCATCACATCAAACGGGAAACTAGAGGCATTTAAAGATCTCACTATCTAA 2706 0.34 MGASLPSKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEEDHPPENERCEHGEMLLYKISLLEECGFLERALEELHKKESKIVDKLVYKEQEVSLLVKLGHLEEGEALYQALLSMNPDNYRYYEGLQKCVGLYLEDGQYSPDQIDRLDSLYKTLVQQYKWSSAVKRIPLDFLQGDKFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELERSIRMSGQYPGRMDKEPPSTLMWTLFLLAQHYDRRGQYEVALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLCTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDDNMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSASGVSKSGKRHIKPVDPDPNGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYTRKQKILLALQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNASVTDSEKLIWSVLEAERPTISQLHEKSLFEANNSFLEKHKDSLMHRAAFAEILHILDSNRKSEAVKFIEESTNNIVPRNGALGPIREWNLKDCIAVHKLLGTVLADQDAALRWKVRCAEYFPYSTYFEGCHSSASPNSAFNQLRKNSENESPNHSVGGQNVGSITSNGKLEAFKDLTI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01902 901 Gene3D - 2 503 - -
Gma08g01902 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Gma08g01902 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Gma08g01902 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Gma08g01902 901 Gene3D - 505 727 - -
Gma08g01902 901 MobiDBLite consensus disorder prediction 866 886 - -
Gma08g01902 901 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Gma08g01902 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 880 - -
Gma08g01902 901 PANTHER BNAC02G23120D PROTEIN 10 880 - -
Gma08g01902 901 MobiDBLite consensus disorder prediction 577 645 - -
Gma08g01902 901 PIRSF NAT_A 1 818 IPR021183 -
Gma08g01902 901 SUPERFAMILY TPR-like 384 724 IPR011990 GO:0005515
Gma08g01902 901 MobiDBLite consensus disorder prediction 577 593 - -
Gma08g01902 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Gma08g01902 901 Coils Coil 596 620 - -
Gma08g01902 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Gma08g01902 901 MobiDBLite consensus disorder prediction 606 622 - -
Gma08g01902 901 Pfam TPR repeat 84 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01902 Gma-Chr8 17095155 17108693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01902 K20792 - gmx:100820094 1757.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01902 08 17095155 17108693 Gma08g01902 08 17095155 17108693 ECH
Gma07g00322 07 2751567 2765368 Gma08g01902 08 17095155 17108693 GST
Gma13g03228 13 46350029 46363230 Gma08g01902 08 17095155 17108693 PCT
Gma08g01902 08 17095155 17108693 Gma13g03228 13 46350029 46363230 PCT