Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00322 ATGTCCTCGACAATGTTGGAGATGAAAGGATGGTTGTTACAGGAACCTAAGACTATGAGTGGGTGGGTGAGCTTGAGGGTCACAGTAGGGTTACCTTGCCTCGCAAACGCAGTTGCTTTGCTTTGCAGCATCCCTGCATCAATGGGCGCTTCTCTGCCCCCCAAGGAGGCCAACCTCTTCAAGCTTATTGTCaaatcatatgaaaccaaacaatataaaaagggtctcaaagccgctgatgccattttgaaaaaattcccagaccatggagaaactttatcgatgaagggtttgacattaaattgcatggatcgtaagtccgaagcatatgaacttgttcgtcaaGGATTAAAGaatgaccttaaaagtcatgtttgctggcatgtttatggtctcctttatcggtccgacagagaatacagggaggcgatcaagtgctatcgaaatgcactgagaatagatcccgacaatattgaaattcttcgtgacctatcactcctacagGCACAAATGCGAGATTTGTCAGGCTTTGTTGAGACAAGACAACAACTTTTGACTTTGAAGCCAAATCATCGCATGAACTGGATTGGATTTTCTGTAGCCCATCATTTGAACTCTAATTCATTCAAAGCAGTTGAAATTTTGGAAGCATATGAAGGGACTTTGGATGAGGATCATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATACAAGatctcattgttagaggaatgcgggtttcttgagagagctctggaggagttgcacaaaaaagaatctaaaattgttgataagcttgtatacaaagaacaagaggtttcacttttagtaaagcttggtcacttagacgaaggcgaagctttgtaccgggcattactttccatgaatcctgataattatagATACTATGAAGGTCTCCAAAAGTGTGTTGGATTATATTTAGAAGATGGCCAGTACTCTCCTGATCAAATAGATCGGTTAGATTCATTGTACAAAACACTTGTACAACAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGGTGGCCAATTTCGAGAAGCAGCAGACAGTTATATTAGGCCTCTCCTAACCAAGGGAGTTCCATCTCTGTTCTCTGATCTATCATCTTTGTACAATCATCCTGGGAAGGCCGACATTTTGGAACAACTTATTCTTGAGTTAGAGCATTCAATTAGGATGTCTGGCCATTATCCTGGAAGGACGGACAAAGAACCCCCTTCTACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGGCGAGGCCAATATGAAATTGCTCTTTCTAAAATCGATGAAGCTATAGAACATACACCTACAGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCCGATCGTTATGTTAATAGTGAATGTGTAAAGCGCATGTTGCAGGCTGATCAGGTGGCATTGGCTGAAAAAACTGCTGTATTGTTCACAAAAGATGGGGATCAACACAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCGGGTGAAAGCTACTTCCGTCAGGGTGATCTTGGACGGGCTCTCAAGAAATTTTTAGCAGTGGAGAAGCATTATGCCGATATTACTGAGGACCAATTTGATTTTCATTCATACTGCTTACGGAAAATGACTTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATATTTTCATAAAGCAGCAGCTGGTGCTATCAGATGCTATATTAAGTTGCATGATTCTCCTCCAAAGTCTACAGCAGAGGAAGATGATAATATGTCAAAGTTGCTTCCTTCTCAGAAGAAGAAAATGAGACAAAAGCAGAGAAAGGCAGAAGCAAGAGCCAAAAAGGAGGCAGAAGAGAAGAATGAAGAGTCAAGTGCCAGTGGGGTATCAAAGTCTGGGAAGCGGCACGTAAAACCTGTTGACCCTGATCCAAACGGGGAGAAGTTGTTGCAGGTTGAAGATCCACTGTCAGAAGCTACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTGATTCATTGGAGACGCACTTGCTCTCTTTTGAATTATATACAAGGAAACAAAAGATTTTGCTTGCCTTGCAGGCCGTAAAGCAGTTACTGAGATTGGATGCTGAACACCCTGATTCGCATCGTTGTTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATGCTCCTGTGACCGACAGTGAGAAACTGATTTGGAGTGTCTTAGAGGCTGAGCGCCCTACTATTAGTCAGCTGCATGAGAAATCCCTGTTTGAGGCAAACAACTCTTTCCTTGAAAAACATAAAGATTCTTTGATGCATCGAGCAGCTTTTGCAGAAATCTTGCACATTTTGGATTCAAACAGAAAGTCTGAGGCTGTTAAGTTCGTTGAAGATTCAACAAATAACATAGTGCCCAGAAATGGAGCACTTGGACCAATCAGGGAATGGAATCTTACAGACTGTATTGCAGTTCACAAGCTTCTTGAAACAGTTCTTGCTGATCAGGATGCTGGATTGAGGTGGAAGGTGCGTTGTGCAGAGTATTTCCCATATTCTACATACTTCGAGGGATGCCACAGCTCTGCCTCTCCCAACTCGGCCTTCAGTCAGTTACGTAAGAACTCTGAAAATGAGAGTCTAAACCATTCAGTGGATGGTCAAAATGTGGGCTCCATCACATCAAACGGGAAACTAGAGGCATTTAAAGATCTCACTATCTGA 2847 0.3512 MSSTMLEMKGWLLQEPKTMSGWVSLRVTVGLPCLANAVALLCSIPASMGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNSFKAVEILEAYEGTLDEDHPPENERCEHGEMLLYKISLLEECGFLERALEELHKKESKIVDKLVYKEQEVSLLVKLGHLDEGEALYRALLSMNPDNYRYYEGLQKCVGLYLEDGQYSPDQIDRLDSLYKTLVQQYKWSSAVKRIPLDFLQGGQFREAADSYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRMSGHYPGRTDKEPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDDNMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSASGVSKSGKRHVKPVDPDPNGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYTRKQKILLALQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWSVLEAERPTISQLHEKSLFEANNSFLEKHKDSLMHRAAFAEILHILDSNRKSEAVKFVEDSTNNIVPRNGALGPIREWNLTDCIAVHKLLETVLADQDAGLRWKVRCAEYFPYSTYFEGCHSSASPNSAFSQLRKNSENESLNHSVDGQNVGSITSNGKLEAFKDLTI 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00322 948 Gene3D - 49 550 - -
Gma07g00322 948 SUPERFAMILY TPR-like 65 203 IPR011990 GO:0005515
Gma07g00322 948 Pfam TPR repeat 131 170 - -
Gma07g00322 948 MobiDBLite consensus disorder prediction 624 640 - -
Gma07g00322 948 ProSiteProfiles TPR repeat profile. 124 157 IPR019734 GO:0005515
Gma07g00322 948 SUPERFAMILY TPR-like 238 474 IPR011990 GO:0005515
Gma07g00322 948 Coils Coil 643 667 - -
Gma07g00322 948 Pfam N-terminal acetyltransferase A, auxiliary subunit 234 743 IPR021183 -
Gma07g00322 948 SUPERFAMILY TPR-like 428 754 IPR011990 GO:0005515
Gma07g00322 948 MobiDBLite consensus disorder prediction 653 669 - -
Gma07g00322 948 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 43 927 - -
Gma07g00322 948 SMART tpr_5 90 123 IPR019734 GO:0005515
Gma07g00322 948 SMART tpr_5 427 460 IPR019734 GO:0005515
Gma07g00322 948 SMART tpr_5 124 157 IPR019734 GO:0005515
Gma07g00322 948 MobiDBLite consensus disorder prediction 624 693 - -
Gma07g00322 948 Gene3D - 552 772 - -
Gma07g00322 948 PANTHER BNAC02G23120D PROTEIN 43 927 - -
Gma07g00322 948 PIRSF NAT_A 45 865 IPR021183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00322 Gma-Chr7 2751567 2765368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00322 K20792 - gmx:100793968 1764.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00322 07 2751567 2765368 Gma07g00322 07 2751567 2765368 ECH
Gma07g00322 07 2751567 2765368 Gma08g01902 08 17095155 17108693 GST
Gma13g03228 13 46350029 46363230 Gma07g00322 07 2751567 2765368 PCT
Gma07g00322 07 2751567 2765368 Gma13g03228 13 46350029 46363230 PCT