Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01212 ATGATGAAGTGTTTCTCGGTGTCCTTAGCCTCTTTATGGGTTCTCCTTGCTCTCTTTTCTCTGAGTGTGTCATCTCAAAATATATCTGAGAGTGGGCTACAGCAAGCTAGCCTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGACGAATTTTTACAAAGTGCTGAAATGGTTTCTCAACGTCTCAAGGCTCACGGATATCAGTTTGTCGTGGTGGATTACCTCTGGTATAGGAAGAAAGTCAAGGGTGCTTACCCTGATTCTCTTGGATTTGACGTGATCGATGAATGGGGAAGGATGATCCCTGACCCAGGAAGGTGGCCTTCTTCCATAGGTGGGAAGGGATTCAGTGAAGTAGCTAATAAAGTACATAGTTTAGGTTTGAAGTTTGGGATTCACGTTATGAGAGGGATAAGCACGCAAGCTGTCAATGCAAACACCCCTATCCTAGATATAACAAAGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCATGCAAAAGACATAGCAATGCCAGAAAGGGCTTGTGCatggatgcctcacggtttcatgagtgtaaatacgaagttgggagctgggagagcttttttgaaatccctttatgagcagtatgctgcatggggtgttgatctcgtgaaacatgactgtgtgtttggagatgacttggatttaaatgaaataagctatgtgtcggagGTTCTCAGTGTGCTTAATCGCCCTATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATCGAATAACAGGAGATGACTGGGATAAATGGGAGGACGTCAAGGCTCATTTTGATGTAACAAGGGATTTTTCTACAGCTAATATGATAGGAGGGAAAGGTTTGAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGATCAAATGAAGGTCCACACAGATTTAGTAAACTCACTCTAGAAGAAAAAAGGACACAGATGACTTTGTGGTCTTTGGCAAAGTCTCCCCTTATGTATGGGGGGGATGTGCGGAGGATCGATCCAACCACATACGAACTTATCACAAATCCTACCCTGCTAGAGATTAATTACTTTAGCTCAAACAATATGGAGTTTCCTTACATCACAAGCTCAATTAACTTGAAGCACCCTGGAGGGAAAGAAAGAAGACTTAAGAAAGGAATACATTCATTGGGTTTGACTAGCTGCAGTGAATCAAAGGCGAGGGGTTGGTCTATTGAAAGTCTTAACCAAGATCTTGAAAGAATCTGTTGGAAAAAGGGTTTAGAAAACAAGCATCAGGCCCCTTTCTGCGTACACAAAAGAGAACTTCAATTCAGATTAGACGGGGTGAGTATGTATCAAGAGGACTATCGAGGGAAACATCAATTAGTTGCAACTGACAGAATGAAATTTTGCTTGGACGCTTCTCCAAGACGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGTACATTTTCTCCATGCAGATGGGATTCAAATCAGATCTGGGAACTGAACTCCAATGGGACCATGGTAAATAGTTACTCCGGTCTTTGTGCAACTGTAGAGTATATTGAAGCTAATGTTAATTCTGGTGGGATTCGCTCTTGGATCGCAACAGGAAGAACAGGGGAAATCTATCTTGCTTTCTTCAATCTAAGCGAACAGAAGACGGAGATATATGCAAAGACATCATATCTGGCTAAGGTTCTTCCTGACAAAAGCATCACTTCATGCAAGGGCGAGGAAGTGTGGAGTGGAACAGATGTAATAACAACGCAAGGGACGATATCAATGAACGTGGAAATTCATGGATGTGCACTATTTGTTCTAAATTGCAACTAG 1908 0.391 MMKCFSVSLASLWVLLALFSLSVSSQNISESGLQQASLPPRGWNSYDSFCWTISEDEFLQSAEMVSQRLKAHGYQFVVVDYLWYRKKVKGAYPDSLGFDVIDEWGRMIPDPGRWPSSIGGKGFSEVANKVHSLGLKFGIHVMRGISTQAVNANTPILDITKGGAYQESGRVWHAKDIAMPERACAWMPHGFMSVNTKLGAGRAFLKSLYEQYAAWGVDLVKHDCVFGDDLDLNEISYVSEVLSVLNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDKWEDVKAHFDVTRDFSTANMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFSKLTLEEKRTQMTLWSLAKSPLMYGGDVRRIDPTTYELITNPTLLEINYFSSNNMEFPYITSSINLKHPGGKERRLKKGIHSLGLTSCSESKARGWSIESLNQDLERICWKKGLENKHQAPFCVHKRELQFRLDGVSMYQEDYRGKHQLVATDRMKFCLDASPRRKVTSKEFKRGTFSPCRWDSNQIWELNSNGTMVNSYSGLCATVEYIEANVNSGGIRSWIATGRTGEIYLAFFNLSEQKTEIYAKTSYLAKVLPDKSITSCKGEEVWSGTDVITTQGTISMNVEIHGCALFVLNCN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01212 635 PANTHER ALPHA-GALACTOSIDASE 7 632 - -
Gma08g01212 635 Gene3D - 548 634 IPR013780 -
Gma08g01212 635 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 7 632 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 SUPERFAMILY Glycosyl hydrolase domain 551 633 - -
Gma08g01212 635 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 Pfam Alpha galactosidase C-terminal beta sandwich domain 553 632 IPR041233 -
Gma08g01212 635 Gene3D Aldolase class I 30 387 IPR013785 -
Gma08g01212 635 Pfam Alpha galactosidase A 52 147 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 Pfam Alpha galactosidase A 209 384 IPR002241 GO:0004553|GO:0005975
Gma08g01212 635 SUPERFAMILY Ricin B-like lectins 484 562 IPR035992 -
Gma08g01212 635 SUPERFAMILY (Trans)glycosidases 36 385 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01212 Gma-Chr8 10296289 10301779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01212 14 464 Glycoside Hydrolase AT3G26380 67.174 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01212 - - gmx:100802840 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01212 08 10296289 10301779 Gma08g01212 08 10296289 10301779 ECH
Gma05g01726 05 38900989 38906498 Gma08g01212 08 10296289 10301779 GST
Gma08g01212 08 10296289 10301779 Gma18g00122 18 967501 970414 PCT
Gma08g01212 08 10296289 10301779 Gma11g02452 11 39834093 39839331 PCT