Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01726 ATGATGAAGTGTTTCTCGGTGTCCTTATCCTCTTTATGGGTTCTCCTTGCTCTCTGTTCTCTGAGTGTGTTATCGCAAAATATATCTCAGAGTGGCCTACAGCAAGCTAGCCTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACGATTTCTGAAGAAGAATTCTTACAAAGTGCTGAAATAGTTTCTCAACGTCTCAAGGCTCATGGATATCAGTTTGTCGTGGTGGATTACCTCTGGTATAGGAAGAAAGTCACGGGTGCTTATCCTGATTCTCTTGGATTTGACGTGATTGATGAATGGGGAAGGATGCTCCCTGACCCAGGAAGGTGGCCTTCTTCCATAGGCGGGAAGGGATTCAGTGATGTAGCTAATAGAGTACATAGTTTAGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCTGTCAATGCAAACACCCCTATCCTAGATACAACAAAGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCGTGCAAAAGACATAGCAATGCCAGAAAGGGCTTGTGCatggatgcctcacggtttcatgagtgtaaatacgaagttgggagctgggagagcttttttgaaatccctttatgagcagtatgctgcatggggtgttgatcttgtgaaacatgattgtgtgtttggtgatgacttggatttaaatgaaataagctatgtgtctgagGTTCTCAGCGAGCTTAATCGCCCTATTGTGTATTCTCTATCTCCCGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTTAACATGTATAGAATAACAGGAGATGACTGGGATTTATGGGAGGACGTCAAGGCTCATTTTGATGTAACAAGGGATTTTTCTACAGCTAATATGATAGGAGGAAAAGGTTTAAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGATCAAATGAAGGTCCACACAGGTTTAGTAAACTCACTCTAGAAGAAAAAAGGACACAGATGACTTTGTGGTCTTTGGCGAAGTCTCCCCTTATGTATGGGGGGGATGTGAGGAAGATTGATGCAACCACATATGAACTTATCACAAATCCTACCCTGCTAGAGATTAATTACTTCAGCTCAAACAATATGGAGTTTCCTTACGTCACAAGCTCAATTAACTTGAAGCACCCTGGAGGGAAAAAAAGAAGACCTAAGAAAGGAATAAAAGCATCATTTACACATTCATTGGGTTTGACTGGCTGCAGTGAATCAAAGGCGAGTGGTTGGTCTATTGAAAGTCTTAACCAAGATCTTGAAAGAATCTGTTGGAAAAATGGTTTAGAAAACAAGCATCAGGCCACTTTCTGCGTACACAAAAGAGAACTTCAATTCAGATTAGATGGGGTGAGTATGTATCCAGCAGACTATCGAGGGAAACATCAATTAGTTGCAACTGACAGAATGAAATTTTGCTTGGATGCTTCTCCAAAACGAAAGGTTACTTCTAGAGAGTTCAGGAGAGGTACATTTTCTCCATGCAGATGGGATTCAAATCAGATCTGGGAACTGAACTCCAATGGGACCATGGTAAATAGTTACTCCGGTCTTTGTGCAACTGTAGAGTATGTTGAAGCAAATGTTAATTCTGGTGGGATTCGCTCTTGGATCGCAACAGGAAGAACAGGGGAAATCTATCTTGCTTTCTTCAATCTAAGCGAACAGAAGACGGAGATATATGCAAAGACATCATATCTGGCTAAGGTTCTTCCTGACAAAAGCATCACTTCATGCAAGGGCAAGGAAGTGTGGAGTGGAACAGATGTAATAACGACGCAGGGGACGATATCAATGAACGTGGAAATTCATGGATGTGCACTATTTCTTCTAAATTGCAACTAG 1923 0.389 MMKCFSVSLSSLWVLLALCSLSVLSQNISQSGLQQASLPPRGWNSYDSFCWTISEEEFLQSAEIVSQRLKAHGYQFVVVDYLWYRKKVTGAYPDSLGFDVIDEWGRMLPDPGRWPSSIGGKGFSDVANRVHSLGLKFGIHVMRGISTQAVNANTPILDTTKGGAYQESGRVWRAKDIAMPERACAWMPHGFMSVNTKLGAGRAFLKSLYEQYAAWGVDLVKHDCVFGDDLDLNEISYVSEVLSELNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDLWEDVKAHFDVTRDFSTANMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFSKLTLEEKRTQMTLWSLAKSPLMYGGDVRKIDATTYELITNPTLLEINYFSSNNMEFPYVTSSINLKHPGGKKRRPKKGIKASFTHSLGLTGCSESKASGWSIESLNQDLERICWKNGLENKHQATFCVHKRELQFRLDGVSMYPADYRGKHQLVATDRMKFCLDASPKRKVTSREFRRGTFSPCRWDSNQIWELNSNGTMVNSYSGLCATVEYVEANVNSGGIRSWIATGRTGEIYLAFFNLSEQKTEIYAKTSYLAKVLPDKSITSCKGKEVWSGTDVITTQGTISMNVEIHGCALFLLNCN 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01726 640 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Gma05g01726 640 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Gma05g01726 640 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Gma05g01726 640 SUPERFAMILY Ricin B-like lectins 491 567 IPR035992 -
Gma05g01726 640 PANTHER ALPHA-GALACTOSIDASE 7 637 - -
Gma05g01726 640 SUPERFAMILY Glycosyl hydrolase domain 556 637 - -
Gma05g01726 640 SUPERFAMILY (Trans)glycosidases 36 385 IPR017853 -
Gma05g01726 640 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Gma05g01726 640 Gene3D Aldolase class I 30 387 IPR013785 -
Gma05g01726 640 Gene3D - 553 639 IPR013780 -
Gma05g01726 640 Pfam Alpha galactosidase A 209 384 IPR002241 GO:0004553|GO:0005975
Gma05g01726 640 Pfam Alpha galactosidase C-terminal beta sandwich domain 558 637 IPR041233 -
Gma05g01726 640 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 7 637 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01726 Gma-Chr5 38900989 38906498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01726 14 469 Glycoside Hydrolase AT3G26380 66.812 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01726 - - gmx:100783705 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01726 05 38900989 38906498 Gma08g01212 08 10296289 10301779 GST
Gma05g01726 05 38900989 38906498 Gma18g00122 18 967501 970414 PCT
Gma05g01726 05 38900989 38906498 Gma11g02452 11 39834093 39839331 PCT