Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00480 ATGATTGTGCGTTGGATGACGAATTTGGGTAGTTCTAGGCTATGGAGGCTAACAAGGCTGATTGGGACACACTTTTTGAGCCTTATCCGTTTTTTGAATCATAAGAATTATTTGCAGATAGACATATCAGCGGAGAATGCTGATGATCTTAGAAAATGGAAAGGTTGGGTTGAGTCTCGCCTGCGCCAGTTGACATTGAAAACAAATCCAGACCTTTCCACTGCTCCTACTTTATGGGACTGCGACGTAAGCAAGGATTTCCTGTCAATAATGGTGGACAGTTTGATACTAACCGTTGAAGAATTTAAGCATTCTGTCAACATATACACTCTATGGAAACCTGGAATGGACATCAATGTTTCCCACGTGAAACGTCGTAATATACCTACCTTTGTAACTTGGGAGATTAAGCCAAGTTCAGAGTTAAGGGTTTCTGACCATAGTCAAGCAGAAAAGTCTCAAGAAGGTAAAATGGTTGTATTTGGAGCAAATGGTGATAGGAAGAGAAAACAAGCAGAGGATAGTGTGAATTGTACTGACTCGGAAATCAATAGTACTAGTGAGAAACCTGATTTGAAATCTTCAGTGGAGTTTGCTGGGGATAGAGAGACCAATGGATCAGTGACAAGCAACTTACAAGTTACTTCCACGGGTGCATCTAGTTCTAAAGAAGCTAAAAAGCTAGCCATTGAGAAGATTATGTGTGGTCCATATGATGCACAACGAGTCTTTTCAGAAGAACCTGATGAGCTTGAAGATGATCTTGAGTTCAGAAATCAAGTCAAAGATTTTGGTGGGAAAATGAAAAACAGCAACTTGGACTCTTCATACTCAGAGATTGCAGTTGCCACGGAACCAATTATTCCTAAGAAGGAAACCACTTCTGCAACTCGTTTATACTCAAATGGGGGCTCAGAAGAGCTTGAGGTTTAA 933 0.4062 MIVRWMTNLGSSRLWRLTRLIGTHFLSLIRFLNHKNYLQIDISAENADDLRKWKGWVESRLRQLTLKTNPDLSTAPTLWDCDVSKDFLSIMVDSLILTVEEFKHSVNIYTLWKPGMDINVSHVKRRNIPTFVTWEIKPSSELRVSDHSQAEKSQEGKMVVFGANGDRKRKQAEDSVNCTDSEINSTSEKPDLKSSVEFAGDRETNGSVTSNLQVTSTGASSSKEAKKLAIEKIMCGPYDAQRVFSEEPDELEDDLEFRNQVKDFGGKMKNSNLDSSYSEIAVATEPIIPKKETTSATRLYSNGGSEELEV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00480 310 MobiDBLite consensus disorder prediction 200 223 - -
Gma08g00480 310 Pfam Poly(A) polymerase predicted RNA binding domain 31 67 IPR007010 GO:0003723|GO:0043631
Gma08g00480 310 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 31 132 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gma08g00480 310 MobiDBLite consensus disorder prediction 144 223 - -
Gma08g00480 310 MobiDBLite consensus disorder prediction 162 176 - -
Gma08g00480 310 PANTHER POLY A POLYMERASE 32 304 - -
Gma08g00480 310 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 32 304 - -
Gma08g00480 310 MobiDBLite consensus disorder prediction 177 192 - -
Gma08g00480 310 Gene3D Poly(A) polymerase predicted RNA binding domain 31 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00480 Gma-Chr8 4003713 4005500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00480 K14376 - gmx:102660127 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00895 07 9701243 9712804 Gma08g00480 08 4003713 4005500 ECH
Gma08g00480 08 4003713 4005500 Gma08g00480 08 4003713 4005500 ECH
Gma05g02351 05 44420724 44424832 Gma08g00480 08 4003713 4005500 GST