Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02351 ATGGGGAACCCCGGACTGAACAATCGCGATAATGGGCAGCAGCAACGCTTAGGCATAACAGAACCCATCTCATTGGGTGGACCTACTGAATATGATGTCATCAAGACACGTGAACTTGAGAAGTACTTGCAAGATGCTGGCTTGTATGAGAATCAGCAGGAGGCAATTGTGAAGATTTGGGTCAAAATCATTAGCCGTGCAAAGGGACTAAACAAGCAACTGGTGCATAGCCCTGGAGCAAATATAGACACTCTTTGTGTGGGACCGAGACATGCATCCAGAGATGAAGATTTCTTTGGTGACCTACATAGGATGCTATCTAAGATGCCAGAAGTAACAGAGTTGCACCCTGTGCCTGATGCTCATGTACCAGTAATGAGGTTCAAGTTCAATGGTGTTTATATAGATCTCCTATATGCAAAATTATCTTTGAGGGACTTGGATATATCACAGGAGTTAATATTACAAAATGCAGATGAGGAAACTGTCTGTAGTCTTAATGGTTGTAGAGTGACTGATAAACTATTTCCTAATGCACTGCCTAACATGTTAGTGTCTCGATTCTTCAGGGTATATACTCAGTGGTGTTGGCCAAATCCAGTAATGCTTTGTGCTATTGAAGAGGGATCAGTTGGACTTCAAATTTGGGATCCTAGAAGATATCCCAATGATAGGTTCCATCTAATGCCAATAATTACCCCTGCTTATGCTTGCATGAATTCTAGCTACAATGTGTCGTCAATTACATTGTGTATTATGACAGAGGAGTTTCAGAGGGGAAATGAAATATGTGAGATAGACATATCAGGGGAGAATGCTGATGATCTTAGAAAATGGAAAGGCTGGGTTGAGTCTCACCTCCGCCAATTGAAAGGCACATTTATGGCATGCTTCAGTGTCATCCACATCCTGGTGACTCTTCAGACAAATCCAGACCTTTCCACTGCTCCAACTTCATGGCGCTGCAACGTAAGCAAGGAGTTCCTGTCAACGATGGTGGACAGTTTGATATAA 1014 0.426 MGNPGLNNRDNGQQQRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQQEAIVKIWVKIISRAKGLNKQLVHSPGANIDTLCVGPRHASRDEDFFGDLHRMLSKMPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRDLDISQELILQNADEETVCSLNGCRVTDKLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEIDISGENADDLRKWKGWVESHLRQLKGTFMACFSVIHILVTLQTNPDLSTAPTSWRCNVSKEFLSTMVDSLI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02351 337 MobiDBLite consensus disorder prediction 1 20 - -
Gma05g02351 337 Pfam Poly(A) polymerase central domain 175 265 IPR007012 GO:0004652|GO:0043631
Gma05g02351 337 Gene3D - 172 281 - -
Gma05g02351 337 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 174 290 - -
Gma05g02351 337 MobiDBLite consensus disorder prediction 1 23 - -
Gma05g02351 337 PANTHER POLY A POLYMERASE 1 175 - -
Gma05g02351 337 PANTHER POLY A POLYMERASE 174 290 - -
Gma05g02351 337 CDD NT_PAP_TUTase 75 173 - -
Gma05g02351 337 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 175 - -
Gma05g02351 337 SUPERFAMILY PAP/OAS1 substrate-binding domain 174 265 - -
Gma05g02351 337 Pfam Poly(A) polymerase central domain 18 175 IPR007012 GO:0004652|GO:0043631
Gma05g02351 337 Gene3D Beta Polymerase, domain 2 50 171 IPR043519 -
Gma05g02351 337 SUPERFAMILY Nucleotidyltransferase 18 174 IPR043519 -
Gma05g02351 337 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 265 293 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02351 Gma-Chr5 44420724 44424832 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02351 K14376 - jre:108981181 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02351 05 44420724 44424832 Gma08g00480 08 4003713 4005500 GST